RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 HOXA10P31260 410 aaPredicted RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 GRIK5Q16478 980 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 TAF12Q16514 161 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 SH2D4BQ5SQS7 431 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 CCDC125Q86Z20 511 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 PASD1Q8IV76 773 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 GPD1LQ8N335 351 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 MS4A14Q96JA4 679 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 DDX23Q9BUQ8 820 aaKnown RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 POLRMTO00411 1230 aaKnown RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 EIF3DO15371 548 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 SREBF1P36956 1147 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 PMS1P54277 932 aaKnown RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 NAB2Q15742 525 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 RINT1Q6NUQ1 792 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 ENOSF1Q7L5Y1 443 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 SH3RF1Q7Z6J0 888 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 FAM149B1Q96BN6 582 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 GMCL1Q96IK5 515 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 KCNH7Q9NS40 1196 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 TTLL3Q9Y4R7 772 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 DGAT1O75907 488 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 FAM133BQ5BKY9 247 aaKnown RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 C7orf31Q8N865 590 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 GBP7Q8N8V2 638 aaPredicted RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 SYN2Q92777 582 aaPredicted RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 CNOT10Q9H9A5 744 aaKnown RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 DDX4Q9NQI0 724 aaKnown RBP15.34■□□□□ 0.05
COL20A1-206ENST00000479501 ATRNO75882 1429 aa15.34■□□□□ 0.05
COL20A1-206ENST00000479501 A6NJR5 290 aa15.33■□□□□ 0.05
COL20A1-206ENST00000479501 CYP2C19P33261 490 aa15.33■□□□□ 0.05
COL20A1-206ENST00000479501 KLHDC7AQ5VTJ3 777 aa15.33■□□□□ 0.05
COL20A1-206ENST00000479501 SLC10A4Q96EP9 437 aa15.33■□□□□ 0.05
COL20A1-206ENST00000479501 SLITRK6Q9H5Y7 841 aa15.33■□□□□ 0.05
COL20A1-206ENST00000479501 AGO2Q9UKV8 859 aaKnown RBP15.33■□□□□ 0.05
COL20A1-206ENST00000479501 LTN1O94822 1766 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 CYP26A1O43174 497 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 PLS3P13797 630 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 KLRC1P26715 233 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 YWHAGP61981 247 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL20A1-206ENST00000479501 SLC15A2Q16348 729 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 CCHCR1Q8TD31 782 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 ATP2A3Q93084 1043 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 HEMGNQ9BXL5 484 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 OR6B2Q6IFH4 312 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 PTF1AQ7RTS3 328 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 LRRC8CQ8TDW0 803 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 DNAJC17Q9NVM6 304 aaKnown RBP15.33■□□□□ 0.04
COL20A1-206ENST00000479501 AMACRQ9UHK6 382 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 RGPD8O14715 1765 aaPredicted RBP15.33■□□□□ 0.04
COL20A1-206ENST00000479501 SART1O43290 800 aaKnown RBP15.33■□□□□ 0.04
COL20A1-206ENST00000479501 BMP6P22004 513 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 ADCY1Q08828 1119 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 CCNI2Q6ZMN8 369 aaPredicted RBP15.33■□□□□ 0.04
COL20A1-206ENST00000479501 ZNF280CQ8ND82 737 aa15.33■□□□□ 0.04
COL20A1-206ENST00000479501 RBAKQ9NYW8 714 aaPredicted RBP15.33■□□□□ 0.04
COL20A1-206ENST00000479501 MCF2LO15068 1137 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 SETSIPP0DME0 302 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 CA8P35219 290 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 XKR3Q5GH77 459 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 C6orf118Q5T5N4 469 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 RNF168Q8IYW5 571 aaPredicted RBP15.32■□□□□ 0.04
COL20A1-206ENST00000479501 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 RNPC3Q96LT9 517 aaKnown RBP15.32■□□□□ 0.04
COL20A1-206ENST00000479501 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 RSPH10B2B2RC85 870 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 ACSL3O95573 720 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 RSPH10BP0C881 870 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 DDR1Q08345 913 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 HEXIM2Q96MH2 286 aaKnown RBP15.32■□□□□ 0.04
COL20A1-206ENST00000479501 RUSC1Q9BVN2 902 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 MAD1L1Q9Y6D9 718 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 FOXP2O15409 715 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 TBXAS1P24557 533 aaPredicted RBP15.32■□□□□ 0.04
COL20A1-206ENST00000479501 IL9RQ01113 521 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 MYO1EQ12965 1108 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 TBX2Q13207 712 aaPredicted RBP15.32■□□□□ 0.04
COL20A1-206ENST00000479501 ZNF568Q3ZCX4 644 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 LACRTQ9GZZ8 138 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 TBK1Q9UHD2 729 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 SSX2IPQ9Y2D8 614 aa15.32■□□□□ 0.04
COL20A1-206ENST00000479501 DPEP1P16444 411 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 CHRNA3P32297 505 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 CAP2P40123 477 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 RHBDL3P58872 404 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 IRX4P78413 519 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 SCYL3Q8IZE3 742 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 KCTD6Q8NC69 237 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 MORC4Q8TE76 937 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 MYOZ2Q9NPC6 264 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 PNMA3Q9UL41 463 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 SYNJ2BP-COX16A0A087WUM0 186 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 RPS6P62753 249 aaKnown RBP15.31■□□□□ 0.04
COL20A1-206ENST00000479501 COG7P83436 770 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 ADCY2Q08462 1091 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 TAF11Q15544 211 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 C15orf52Q6ZUT6 534 aaKnown RBP15.31■□□□□ 0.04
COL20A1-206ENST00000479501 PDZD4Q76G19 769 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-206ENST00000479501 KIAA0895Q8NCT3 520 aa15.31■□□□□ 0.04
COL20A1-206ENST00000479501 GSDMBQ8TAX9 411 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms