RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 RBM23Q86U06 439 aaKnown RBP10.08□□□□□ -0.8
CMTM1-208ENST00000479381 COLGALT1Q8NBJ5 622 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 DDX12PQ92771 950 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 LPPQ93052 612 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 TMEM169Q96HH4 297 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 IFT74Q96LB3 600 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 MTMR9Q96QG7 549 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 FAM105AQ9NUU6 356 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 FAM50BQ9Y247 325 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 FNDC1Q4ZHG4 1894 aaPredicted RBP10.08□□□□□ -0.8
CMTM1-208ENST00000479381 CDH23Q9H251 3354 aa10.08□□□□□ -0.8
CMTM1-208ENST00000479381 COL4A6Q14031 1691 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 C5orf67F2Z3F1 127 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 H3BQ06 376 aaPredicted RBP10.07□□□□□ -0.8
CMTM1-208ENST00000479381 FGF18O76093 207 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 CD2BP2O95400 341 aaKnown RBP10.07□□□□□ -0.8
CMTM1-208ENST00000479381 EOMESO95936 686 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 ITGB1P05556 798 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 SRGAP2BP0DMP2 458 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 ITGA4P13612 1032 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 PPM1AP35813 382 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 PBX3P40426 434 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 ALDH7A1P49419 539 aaKnown RBP10.07□□□□□ -0.8
CMTM1-208ENST00000479381 DSC3Q14574 896 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 NAALADL2Q58DX5 795 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 NOTUMQ6P988 496 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 TMC7Q7Z402 723 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 CATSPER3Q86XQ3 398 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 CLP1Q92989 425 aaKnown RBP10.07□□□□□ -0.8
CMTM1-208ENST00000479381 P2RX5Q93086 422 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 CPB2Q96IY4 423 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 EPAS1Q99814 870 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 RC3H2Q9HBD1 1191 aaKnown RBP10.07□□□□□ -0.8
CMTM1-208ENST00000479381 TLR9Q9NR96 1032 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 AGPAT5Q9NUQ2 364 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 DDX19AQ9NUU7 478 aaKnown RBP10.07□□□□□ -0.8
CMTM1-208ENST00000479381 HCSTQ9UBK5 93 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 PLAGL2Q9UPG8 496 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 KIAA1024Q9UPX6 916 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 PCDHB6Q9Y5E3 794 aa10.07□□□□□ -0.8
CMTM1-208ENST00000479381 COL6A3P12111 3177 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 A0A0U1RQF3 1178 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 VWA3AA6NCI4 1184 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 NT5C1B-RDH14C9J2C7 533 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 TNFRSF10AO00220 468 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 LAD1O00515 517 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 NCK2O43639 380 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 LYPLA2O95372 231 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 PDCP20941 246 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 RPA1P27694 616 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 NRIP1P48552 1158 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 CAPSQ13938 189 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 PPP2R5AQ15172 486 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 PADI6Q6TGC4 694 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 KCNT2Q6UVM3 1135 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 HSCBQ8IWL3 235 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 ASAP3Q8TDY4 903 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 RPS6KC1Q96S38 1066 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 HSD17B14Q9BPX1 270 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 TCF25Q9BQ70 676 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 ADPGKQ9BRR6 497 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 POLR3CQ9BUI4 534 aaPredicted RBP10.06□□□□□ -0.8
CMTM1-208ENST00000479381 C2orf40Q9H1Z8 148 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 BHMT2Q9H2M3 363 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 TLE6Q9H808 572 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 RSAD1Q9HA92 442 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 GPRC5CQ9NQ84 441 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 PARP2Q9UGN5 583 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 DNM3Q9UQ16 869 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 PCDHB2Q9Y5E7 798 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 PCDHGA10Q9Y5H3 936 aa10.06□□□□□ -0.8
CMTM1-208ENST00000479381 PLXNA4Q9HCM2 1894 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 CCDC169A6NNP5 214 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-208ENST00000479381 NR1I2O75469 434 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 NPTXRO95502 500 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 XRCC6P12956 609 aaKnown RBP eCLIP10.05□□□□□ -0.8
CMTM1-208ENST00000479381 GLRA2P23416 452 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.8
CMTM1-208ENST00000479381 AXLP30530 894 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 UBE3AQ05086 875 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 NOMO2Q5JPE7 1267 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 CLLU1OSQ5K130 101 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 PTCRAQ6ISU1 281 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-208ENST00000479381 LLGL2Q6P1M3 1020 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 CNNM3Q8NE01 707 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 SPPL3Q8TCT6 385 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 MRPS27Q92552 414 aaKnown RBP10.05□□□□□ -0.8
CMTM1-208ENST00000479381 PABPC5Q96DU9 382 aaKnown RBP10.05□□□□□ -0.8
CMTM1-208ENST00000479381 CALML4Q96GE6 196 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 NECAB3Q96P71 396 aaPredicted RBP10.05□□□□□ -0.8
CMTM1-208ENST00000479381 CASD1Q96PB1 797 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 CEP89Q96ST8 783 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 PLIN2Q99541 437 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 IFT122Q9HBG6 1241 aa10.05□□□□□ -0.8
CMTM1-208ENST00000479381 XPNPEP1Q9NQW7 623 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms