RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 APBA2Q99767 749 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 PANK2Q9BZ23 570 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 ARHGAP39Q9C0H5 1083 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 KATNBL1Q9H079 304 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 TNMDQ9H2S6 317 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 VTA1Q9NP79 307 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 TBC1D22BQ9NU19 505 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 RNF186Q9NXI6 227 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 CCDC39Q9UFE4 941 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 SYNGAP1Q96PV0 1343 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 LOXHD1Q8IVV2 1947 aa7.44□□□□□ -1.22
USP48-208ENST00000479177 CEP350Q5VT06 3117 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 SYCE3A1L190 88 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 H3BRB1 525 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 J3QW42 95 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 DDX39AO00148 427 aaKnown RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 FOXN1O15353 648 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 FZD6O60353 706 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 ARIH2O95376 493 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 TBC1D8O95759 1140 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 CCNE2O96020 404 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 IGHA2P01877 340 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 PDGFAP04085 211 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 NPR3P17342 541 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 RPA1P27694 616 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 CCT6AP40227 531 aaKnown RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 RGS2P41220 211 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 JAK3P52333 1124 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 ZRSR1Q15695 479 aaKnown RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 COL13A1Q5TAT6 717 aaPredicted RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 RRAGBQ5VZM2 374 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 PSAPL1Q6NUJ1 521 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 ZNF746Q6NUN9 644 aaPredicted RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 SEPT14Q6ZU15 432 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 EEPD1Q7L9B9 569 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 MIER3Q7Z3K6 550 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 KCNK18Q7Z418 384 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 DPP9Q86TI2 863 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 FAM35AQ86V20 835 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 CKAP2LQ8IYA6 745 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 GRAMD1CQ8IYS0 662 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 CEP57L1Q8IYX8 460 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 MSL3Q8N5Y2 521 aaKnown RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 CNNM3Q8NE01 707 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 RDM1Q8NG50 284 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 ERMNQ8TAM6 284 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 NEK9Q8TD19 979 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 PAGE5Q96GU1 130 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 CDK5RAP3Q96JB5 506 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 PLIN2Q99541 437 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 SENP7Q9BQF6 1050 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 EIF2AK1Q9BQI3 630 aaKnown RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 SDF4Q9BRK5 362 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 ANP32EQ9BTT0 268 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 POLR3CQ9BUI4 534 aaPredicted RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 NT5C3AQ9H0P0 336 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 CUEDC2Q9H467 287 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 TUT1Q9H6E5 874 aaKnown RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 MAGEF1Q9HAY2 307 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 JPH1Q9HDC5 661 aaPredicted RBP7.43□□□□□ -1.22
USP48-208ENST00000479177 BLOC1S4Q9NUP1 217 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 SLC5A4Q9NY91 659 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 TCEAL9Q9UHQ7 104 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 GJD2Q9UKL4 321 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 ARID2Q68CP9 1835 aa7.43□□□□□ -1.22
USP48-208ENST00000479177 MYH9P35579 1960 aaKnown RBP7.42□□□□□ -1.22
USP48-208ENST00000479177 KRTAP4-8A0A0G2JLE6 195 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 RBM47A0AV96 593 aaKnown RBP7.42□□□□□ -1.22
USP48-208ENST00000479177 WDR64B1ANS9 1081 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 ICMTO60725 284 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 TRPA1O75762 1119 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 FARP2O94887 1054 aaPredicted RBP7.42□□□□□ -1.22
USP48-208ENST00000479177 LETM1O95202 739 aaPredicted RBP7.42□□□□□ -1.22
USP48-208ENST00000479177 SNAI1O95863 264 aaPredicted RBP7.42□□□□□ -1.22
USP48-208ENST00000479177 TGFB3P10600 412 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 HSPA6P17066 643 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 MUTP22033 750 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 SFNP31947 248 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 PSMC4P43686 418 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 ACTR2P61160 394 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 GPLD1P80108 840 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 CAP1Q01518 475 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 SP2Q02086 613 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 CYP4A11Q02928 519 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 PNOCQ13519 176 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 POSTNQ15063 836 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 EPHA7Q15375 998 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 UGCGQ16739 394 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 PERM1Q5SV97 790 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 OLFML2BQ68BL8 750 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 TAPT1Q6NXT6 567 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 CCDC62Q6P9F0 684 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 KCNV1Q6PIU1 500 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 METTL7BQ6UX53 244 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 CATSPER3Q86XQ3 398 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 SCFD2Q8WU76 684 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 RAD54LQ92698 747 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 ERCC4Q92889 916 aaPredicted RBP7.42□□□□□ -1.22
USP48-208ENST00000479177 DYDC2Q96IM9 177 aa7.42□□□□□ -1.22
USP48-208ENST00000479177 HSD17B14Q9BPX1 270 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms