RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 AGMOQ6ZNB7 445 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 RUBCNQ92622 972 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 CCDC136Q96JN2 1154 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 RPS6KC1Q96S38 1066 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 MYADMQ96S97 322 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 CEP89Q96ST8 783 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 RHOBTB2Q9BYZ6 727 aa19.3■□□□□ 0.68
VIM-204ENST00000478746 CLUHO75153 1309 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 CCDC196A0A1B0GTZ2 297 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 SOD2P04179 222 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 URODP06132 367 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 MYBP10242 640 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 AFF1P51825 1210 aaKnown RBP19.29■□□□□ 0.68
VIM-204ENST00000478746 MIER3Q7Z3K6 550 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 MRPL10Q7Z7H8 261 aaKnown RBP19.29■□□□□ 0.68
VIM-204ENST00000478746 KSR1Q8IVT5 923 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 C1orf210Q8IVY1 113 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 GPR152Q8TDT2 470 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 SMG7Q92540 1137 aaKnown RBP19.29■□□□□ 0.68
VIM-204ENST00000478746 SLC5A5Q92911 643 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 SH2D3AQ9BRG2 576 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 RSAD1Q9HA92 442 aa19.29■□□□□ 0.68
VIM-204ENST00000478746 TMEM150BA6NC51 233 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 DDX11L8A8MPP1 907 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 TEX28O15482 410 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 GLUD1P00367 558 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 POMCP01189 267 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 USP11P51784 963 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 RCAN1P53805 252 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 TAS1R1Q7RTX1 841 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 DCLK2Q8N568 766 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 RDM1Q8NG50 284 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 GJA10Q969M2 543 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 NLRP4Q96MN2 994 aa19.28■□□□□ 0.68
VIM-204ENST00000478746 OTOGLQ3ZCN5 2332 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 EDIL3O43854 480 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 MAFO75444 373 aaPredicted RBP19.27■□□□□ 0.68
VIM-204ENST00000478746 RFPL2O75678 378 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 STBD1O95210 358 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 HERC2P3Q9BVR0 1158 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 PIDD1Q9HB75 910 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 ARHGEF3Q9NR81 526 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 AGPAT5Q9NUQ2 364 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 DLL3Q9NYJ7 618 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.27■□□□□ 0.68
VIM-204ENST00000478746 DLGAP2Q9P1A6 1054 aa19.27■□□□□ 0.68
VIM-204ENST00000478746 PRG3Q9Y2Y8 225 aaPredicted RBP19.27■□□□□ 0.68
VIM-204ENST00000478746 CNTNAP2Q9UHC6 1331 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 CEP250Q9BV73 2442 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 PRPF3O43395 683 aaKnown RBP19.26■□□□□ 0.67
VIM-204ENST00000478746 PSMD10O75832 226 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 SPATA31D3P0C874 917 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 LAMP2P13473 410 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 FGD1P98174 961 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 KIAA0319Q5VV43 1072 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 DCLRE1AQ6PJP8 1040 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 SPATA31D4Q6ZUB0 917 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 HDAC7Q8WUI4 952 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 JPH2Q9BR39 696 aaPredicted RBP19.26■□□□□ 0.67
VIM-204ENST00000478746 IFT122Q9HBG6 1241 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 RXFP1Q9HBX9 757 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 CACNA1IQ9P0X4 2223 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 DNAH14Q0VDD8 3507 aa19.26■□□□□ 0.67
VIM-204ENST00000478746 CACNA1BQ00975 2339 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 NCOR2Q9Y618 2525 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 DOCK8Q8NF50 2099 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 GAS2O43903 313 aaKnown RBP19.25■□□□□ 0.67
VIM-204ENST00000478746 OR1G1P47890 313 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 GLUD2P49448 558 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 AKAP17AQ02040 695 aaKnown RBP19.25■□□□□ 0.67
VIM-204ENST00000478746 ADCK5Q3MIX3 580 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 ZNF707Q96C28 371 aaPredicted RBP19.25■□□□□ 0.67
VIM-204ENST00000478746 NT5C3AQ9H0P0 336 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 PLEKHA4Q9H4M7 779 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 UBN1Q9NPG3 1134 aa19.25■□□□□ 0.67
VIM-204ENST00000478746 FANCMQ8IYD8 2048 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 ANHXE9PGG2 379 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 RSPO4Q2I0M5 234 aaPredicted RBP19.24■□□□□ 0.67
VIM-204ENST00000478746 TSGA10IPQ3SY00 556 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 SRGAP1Q7Z6B7 1085 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 PALB2Q86YC2 1186 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 COLGALT2Q8IYK4 626 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 SHDQ96IW2 340 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 SLC2A4RGQ9NR83 387 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 MARCH5Q9NX47 278 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 COL4A3BPQ9Y5P4 624 aa19.24■□□□□ 0.67
VIM-204ENST00000478746 KINO60870 393 aaKnown RBP19.23■□□□□ 0.67
VIM-204ENST00000478746 SRGAP2CP0DJJ0 459 aa19.23■□□□□ 0.67
VIM-204ENST00000478746 ITGA4P13612 1032 aa19.23■□□□□ 0.67
VIM-204ENST00000478746 NCLP19338 710 aaKnown RBP19.23■□□□□ 0.67
VIM-204ENST00000478746 HOXA11P31270 313 aaPredicted RBP19.23■□□□□ 0.67
VIM-204ENST00000478746 DSG1Q02413 1049 aa19.23■□□□□ 0.67
VIM-204ENST00000478746 Q4G0T1 1027 aa19.23■□□□□ 0.67
VIM-204ENST00000478746 UBXN11Q5T124 520 aa19.23■□□□□ 0.67
VIM-204ENST00000478746 ANO5Q75V66 913 aa19.23■□□□□ 0.67
VIM-204ENST00000478746 GET4Q7L5D6 327 aaPredicted RBP19.23■□□□□ 0.67
VIM-204ENST00000478746 RASEFQ8IZ41 740 aa19.23■□□□□ 0.67
VIM-204ENST00000478746 SUMF1Q8NBK3 374 aa19.23■□□□□ 0.67
VIM-204ENST00000478746 CNNM3Q8NE01 707 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms