RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 GJC2Q5T442 439 aaPredicted RBP6.57□□□□□ -1.36
SH3D19-207ENST00000478503 TMEM164Q5U3C3 297 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 DEFB132Q7Z7B7 95 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 ZSWIM2Q8NEG5 633 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 HVCN1Q96D96 273 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 BEGAINQ9BUH8 593 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 REPIN1Q9BWE0 567 aaKnown RBP6.57□□□□□ -1.36
SH3D19-207ENST00000478503 KCTD10Q9H3F6 313 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 CENPHQ9H3R5 247 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 AVENQ9NQS1 362 aaPredicted RBP6.57□□□□□ -1.36
SH3D19-207ENST00000478503 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
SH3D19-207ENST00000478503 SNX12Q9UMY4 172 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 USP20Q9Y2K6 914 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 PRKAB1Q9Y478 270 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 PCDHA2Q9Y5H9 948 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 SBF2Q86WG5 1849 aa6.57□□□□□ -1.36
SH3D19-207ENST00000478503 LAMB1P07942 1786 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 RASA4O43374 803 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 GAS7O60861 476 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 GGCXP38435 758 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 MRPS35P82673 323 aaKnown RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 MAPRE1Q15691 268 aaKnown RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 PAPD7Q5XG87 772 aaKnown RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 HAUS3Q68CZ6 603 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 KCTD16Q68DU8 428 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 TRIM59Q8IWR1 403 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 MSANTD4Q8NCY6 345 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 SPATA4Q8NEY3 305 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 TLR10Q9BXR5 811 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 EHD4Q9H223 541 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 FAM204AQ9H8W3 233 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ACP6Q9NPH0 428 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 MYO1AQ9UBC5 1043 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ODF2LQ9ULJ1 636 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 MYCLP12524 364 aaPredicted RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 XRCC5P13010 732 aaKnown RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ALAS1P13196 640 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 GCFC2P16383 781 aaKnown RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 CYP2C19P33261 490 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 USP11P51784 963 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 SOX10P56693 466 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 EXOC3L4Q17RC7 722 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 KNOP1Q1ED39 458 aaKnown RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 TRIM58Q8NG06 486 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 IL31RAQ8NI17 732 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ERMNQ8TAM6 284 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 NEK9Q8TD19 979 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 DCAF4Q8WV16 495 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ALS2CR12Q96Q35 445 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 KRT12Q99456 494 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 POLR3CQ9BUI4 534 aaPredicted RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 RNF19AQ9NV58 838 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ZIM2Q9NZV7 527 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ASTN2O75129 1339 aaPredicted RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 GOLGA8IPA6NC78 632 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 GOLGA8JA6NMD2 632 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ZBBXA8MT70 800 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 NFIBO00712 420 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 KCNK3O14649 394 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 MAP2K7O14733 419 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 PEX10O60683 326 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 SNX2O60749 519 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 NR3C1P04150 777 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 TMOD1P28289 359 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 MAPK8P45983 427 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 TATDN1Q6P1N9 297 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 ZNF571Q7Z3V5 609 aaPredicted RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 SYCP3Q8IZU3 236 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 U2AF1L4Q8WU68 220 aaKnown RBP6.56□□□□□ -1.36
SH3D19-207ENST00000478503 BHMTQ93088 406 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 TIFAQ96CG3 184 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 HOOK2Q96ED9 719 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 NOX5Q96PH1 765 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 SELENOOQ9BVL4 669 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 GPRC5CQ9NQ84 441 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 GCNT4Q9P109 453 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 VTI1BQ9UEU0 232 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 RAB21Q9UL25 225 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 JRKLQ9Y4A0 524 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 KDM3AQ9Y4C1 1321 aa6.56□□□□□ -1.36
SH3D19-207ENST00000478503 XPOTO43592 962 aaKnown RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 RNF40O75150 1001 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 SLITRK3O94933 977 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 CALCAP01258 141 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 UCHL3P15374 230 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 EIF2AK2P19525 551 aaKnown RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 DNAJB2P25686 324 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 RPA1P27694 616 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 INPP5BP32019 993 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 MAPK9P45984 424 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 SF3A3Q12874 501 aaKnown RBP eCLIP6.55□□□□□ -1.362e-6■□□□□ 11.3
SH3D19-207ENST00000478503 TMED1Q13445 227 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 C6orf118Q5T5N4 469 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 KLHDC7AQ5VTJ3 777 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 RINT1Q6NUQ1 792 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 DDX42Q86XP3 938 aaKnown RBP eCLIP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 SLFN12Q8IYM2 578 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 EHBP1Q8NDI1 1231 aa6.55□□□□□ -1.36
SH3D19-207ENST00000478503 PPHLN1Q8NEY8 458 aaKnown RBP6.55□□□□□ -1.36
SH3D19-207ENST00000478503 ZNF577Q9BSK1 485 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms