RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CAPN7Q9Y6W3 813 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 MSH2P43246 934 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 GRB10Q13322 594 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 PCSK1NQ9UHG2 260 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 CYP11B2P19099 503 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 NR1D1P20393 614 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 PRKCEQ02156 737 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
NPHP4-208ENST00000478423 WDR72Q3MJ13 1102 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 SPATA4Q8NEY3 305 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 BEST2Q8NFU1 509 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 RNF139Q8WU17 664 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 CCDC68Q9H2F9 335 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 STRIP2Q9ULQ0 834 aa15.2■□□□□ 0.02
NPHP4-208ENST00000478423 MAFGO15525 162 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 PRKCBP05771 671 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 LIG3P49916 1009 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 PRPSAP1Q14558 356 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 SCYL1Q96KG9 808 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 EHD4Q9H223 541 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 RIOX1Q9H6W3 641 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 FHOD1Q9Y613 1164 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 SALL1Q9NSC2 1324 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 RGL2O15211 777 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 SLC26A4O43511 780 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 EVI5O60447 810 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 CD44P16070 742 aaKnown RBP15.19■□□□□ 0.02
NPHP4-208ENST00000478423 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
NPHP4-208ENST00000478423 PSMC1P62191 440 aaKnown RBP15.19■□□□□ 0.02
NPHP4-208ENST00000478423 DDR1Q08345 913 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 AGPAT1Q99943 283 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 TRIM10Q9UDY6 481 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 IFT88Q13099 833 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 NBPF9Q3BBW0 867 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 TKFCQ3LXA3 575 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 SYT2Q8N9I0 419 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-208ENST00000478423 PYROXD1Q8WU10 500 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 EXOC4Q96A65 974 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.19■□□□□ 0.022e-7■■■■□ 21.2
NPHP4-208ENST00000478423 GCOM2Q9BZD3 368 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-208ENST00000478423 SUCLA2Q9P2R7 463 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-208ENST00000478423 TFDP2Q14188 446 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 KBTBD4Q9NVX7 518 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 MYOM1P52179 1685 aa15.19■□□□□ 0.02
NPHP4-208ENST00000478423 CCDC160A6NGH7 325 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 SPDYE16A6NNV3 312 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-208ENST00000478423 SUN1O94901 812 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 ICAM1P05362 532 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 GYS2P54840 703 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 RBM43Q6ZSC3 357 aaKnown RBP15.18■□□□□ 0.02
NPHP4-208ENST00000478423 MOV10L1Q9BXT6 1211 aaKnown RBP15.18■□□□□ 0.02
NPHP4-208ENST00000478423 SNX12Q9UMY4 172 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 PFASO15067 1338 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 TADA3O75528 432 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 SSTR3P32745 418 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-208ENST00000478423 KLK7P49862 253 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 GALCP54803 685 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 PSMD6Q15008 389 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 EARS2Q5JPH6 523 aaKnown RBP15.18■□□□□ 0.02
NPHP4-208ENST00000478423 CENPUQ71F23 418 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 BBS5Q8N3I7 341 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 TMX2Q9Y320 296 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 M0QYV0 167 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 GARSP41250 739 aaKnown RBP15.18■□□□□ 0.02
NPHP4-208ENST00000478423 SCYL3Q8IZE3 742 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 POLR3CQ9BUI4 534 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-208ENST00000478423 SLC12A6Q9UHW9 1150 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 HEY1Q9Y5J3 304 aa15.18■□□□□ 0.02
NPHP4-208ENST00000478423 SMIM22K7EJ46 135 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 MED24O75448 989 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 SHMT1P34896 483 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 PTF1AQ7RTS3 328 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 SPATS2Q86XZ4 545 aaKnown RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 FUCA2Q9BTY2 467 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 TTC7AQ9ULT0 858 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 PLAAQ9Y263 795 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 TNPO2O14787 897 aaKnown RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 MT-ND3P03897 115 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 SCP2P22307 547 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 SDC4P31431 198 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 PCK1P35558 622 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 TRIM72Q6ZMU5 477 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 KIF12Q96FN5 646 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 GMCL1Q96IK5 515 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 RSRC1Q96IZ7 334 aaKnown RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 SMYD2Q9NRG4 433 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 EMC2Q15006 297 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 RPS6KA2Q15349 733 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 CCDC197Q8NCU1 140 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 ERGIC2Q96RQ1 377 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 SMARCAD1Q9H4L7 1026 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 DDX4Q9NQI0 724 aaKnown RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 NOC2LQ9Y3T9 749 aaKnown RBP15.17■□□□□ 0.02
NPHP4-208ENST00000478423 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 SH3BP5O60239 455 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 CA4P22748 312 aa15.17■□□□□ 0.02
NPHP4-208ENST00000478423 SREBF1P36956 1147 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms