RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 PCDHB12Q9Y5F1 795 aa8.77□□□□□ -1.01
DDX39B-218ENST00000478365 TTC28Q96AY4 2481 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 MYO7AQ13402 2215 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 LCHNA4D1U4 455 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 TBKBP1A7MCY6 615 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 H3BNC9 293 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 NCK2O43639 380 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 MGEA5O60502 916 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 PPP6R2O75170 966 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 F13A1P00488 732 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 PLA2G4BP0C869 781 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 IGFBP4P22692 258 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 MBTD1Q05BQ5 628 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 GRB10Q13322 594 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 BMS1Q14692 1282 aaKnown RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 PTPAQ15257 358 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 ZRSR1Q15695 479 aaKnown RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 IL17AQ16552 155 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 AAK1Q2M2I8 961 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 DCAF4L1Q3SXM0 396 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 SPOUT1Q5T280 376 aaKnown RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 PDE12Q6L8Q7 609 aaKnown RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 MRPL10Q7Z7H8 261 aaKnown RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 ZNF598Q86UK7 904 aaKnown RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 KSR1Q8IVT5 923 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 SPIRE2Q8WWL2 714 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 MRPL38Q96DV4 380 aaKnown RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 CSRNP2Q9H175 543 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 BMP2KQ9NSY1 1161 aaPredicted RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 FAM105AQ9NUU6 356 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
DDX39B-218ENST00000478365 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
DDX39B-218ENST00000478365 PP2D1A8MPX8 630 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 E9PMD0 336 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 ACKR2O00590 384 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 SPTLC2O15270 562 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 TSPAN1O60635 241 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 TBCAO75347 108 aaKnown RBP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 SSBP05455 408 aaKnown RBP eCLIP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 PRKCBP05771 671 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 PLS3P13797 630 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 GPM6BQ13491 265 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 PRPF4BQ13523 1007 aaKnown RBP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 ECM1Q16610 540 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 RINT1Q6NUQ1 792 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 SLC27A1Q6PCB7 646 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 C1orf186Q6ZWK4 172 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 TMCO2Q7Z6W1 182 aaPredicted RBP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 LINC00301Q8NCQ3 95 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 LARP4BQ92615 738 aaKnown RBP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 KCNN1Q92952 543 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 ZNF668Q96K58 619 aaPredicted RBP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 USP28Q96RU2 1077 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 FZD8Q9H461 694 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 CUEDC2Q9H467 287 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 TMEM134Q9H6X4 195 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 MAGEF1Q9HAY2 307 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 PUF60Q9UHX1 559 aaKnown RBP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 FBXO2Q9UK22 296 aaPredicted RBP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 COG5Q9UP83 839 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 LZTS1Q9Y250 596 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 GIT1Q9Y2X7 761 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 PCDHB2Q9Y5E7 798 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 CLIC4Q9Y696 253 aa8.75□□□□□ -1.01
DDX39B-218ENST00000478365 COL4A4P53420 1690 aaPredicted RBP8.75□□□□□ -1.01
DDX39B-218ENST00000478365 A0A1B0GUA9 196 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 K7ERI5 159 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 INPPL1O15357 1258 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 CUTAO60888 179 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 HIP1RO75146 1068 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 NR1I2O75469 434 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 CSDE1O75534 798 aaKnown RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 FAM13AO94988 1023 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 KRT18P05783 430 aaKnown RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 CHRM1P11229 460 aaPredicted RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 ITGA4P13612 1032 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 ARF4P18085 180 aaPredicted RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 PLCG1P19174 1290 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 FGFR4P22455 802 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 MARCKSP29966 332 aaPredicted RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 CDC25AP30304 524 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 HOXA11P31270 313 aaPredicted RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 DDIT3P35638 169 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 ALDH7A1P49419 539 aaKnown RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 SLC12A3P55017 1021 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 NUCB2P80303 420 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 AMPD3Q01432 767 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 KRT17Q04695 432 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 RNASELQ05823 741 aaKnown RBP8.74□□□□□ -1.01
DDX39B-218ENST00000478365 STRN3Q13033 797 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 AMHR2Q16671 573 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 KYAT1Q16773 422 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 NOMO2Q5JPE7 1267 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 RRAGBQ5VZM2 374 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 MAEAQ7L5Y9 396 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 GPBP1Q86WP2 473 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 RNF169Q8NCN4 708 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 RAD54LQ92698 747 aa8.74□□□□□ -1.01
DDX39B-218ENST00000478365 SYMPKQ92797 1274 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms