RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 EXOC8Q8IYI6 725 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 PSPC1Q8WXF1 523 aaKnown RBP18.68■□□□□ 0.58
TRIM13-208ENST00000478111 TNFRSF25Q93038 417 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 PGBD4Q96DM1 585 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 NECTIN4Q96NY8 510 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 GBP3Q9H0R5 595 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 BMP2KQ9NSY1 1161 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-208ENST00000478111 CFAP54Q96N23 3096 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 VPS13AQ96RL7 3174 aa18.68■□□□□ 0.58
TRIM13-208ENST00000478111 TDRD15B5MCY1 1934 aaKnown RBP18.67■□□□□ 0.58
TRIM13-208ENST00000478111 CARNS1A5YM72 827 aa18.67■□□□□ 0.58
TRIM13-208ENST00000478111 YWHABP31946 246 aaKnown RBP18.67■□□□□ 0.58
TRIM13-208ENST00000478111 CA8P35219 290 aa18.67■□□□□ 0.58
TRIM13-208ENST00000478111 VCPP55072 806 aaKnown RBP18.67■□□□□ 0.58
TRIM13-208ENST00000478111 RNASELQ05823 741 aaKnown RBP18.67■□□□□ 0.58
TRIM13-208ENST00000478111 TCF15Q12870 199 aa18.67■□□□□ 0.58
TRIM13-208ENST00000478111 PTPN14Q15678 1187 aa18.67■□□□□ 0.58
TRIM13-208ENST00000478111 RARS2Q5T160 578 aaKnown RBP18.67■□□□□ 0.58
TRIM13-208ENST00000478111 FERMT3Q86UX7 667 aa18.67■□□□□ 0.58
TRIM13-208ENST00000478111 SUGP1Q8IWZ8 645 aaKnown RBP18.67■□□□□ 0.58
TRIM13-208ENST00000478111 DYDC2Q96IM9 177 aa18.67■□□□□ 0.58
TRIM13-208ENST00000478111 TSHZ2Q9NRE2 1034 aa18.67■□□□□ 0.58
TRIM13-208ENST00000478111 NR2E1Q9Y466 385 aa18.67■□□□□ 0.58
TRIM13-208ENST00000478111 LILRB3O75022 631 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 SLITRK3O94933 977 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 XBP1P17861 261 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 MTHFRP42898 656 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 NR5A1Q13285 461 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 GIT2Q14161 759 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 CTTNQ14247 550 aaKnown RBP18.66■□□□□ 0.58
TRIM13-208ENST00000478111 BMS1Q14692 1282 aaKnown RBP18.66■□□□□ 0.58
TRIM13-208ENST00000478111 EMC2Q15006 297 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 NCAPH2Q6IBW4 605 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 KIAA1841Q6NSI8 718 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 KREMEN2Q8NCW0 462 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 NAP1L4Q99733 375 aaKnown RBP18.66■□□□□ 0.58
TRIM13-208ENST00000478111 ZSWIM4Q9H7M6 989 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 RSAD1Q9HA92 442 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 XPNPEP1Q9NQW7 623 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 DZANK1Q9NVP4 752 aa18.66■□□□□ 0.58
TRIM13-208ENST00000478111 ORC3Q9UBD5 711 aaPredicted RBP18.66■□□□□ 0.58
TRIM13-208ENST00000478111 ASAP2O43150 1006 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 PDGFBP01127 241 aaPredicted RBP18.65■□□□□ 0.58
TRIM13-208ENST00000478111 PTPN5P54829 565 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 CYP4A11Q02928 519 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 XKR9Q5GH70 373 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 RNF149Q8NC42 400 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 SMG8Q8ND04 991 aaKnown RBP18.65■□□□□ 0.58
TRIM13-208ENST00000478111 TCP11Q8WWU5 503 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 RIPOR3Q96MK2 946 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 TMEM175Q9BSA9 504 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 CNTNAP2Q9UHC6 1331 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 PLXNA3P51805 1871 aa18.65■□□□□ 0.58
TRIM13-208ENST00000478111 GAS2O43903 313 aaKnown RBP18.64■□□□□ 0.57
TRIM13-208ENST00000478111 BRD1O95696 1058 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 NCLP19338 710 aaKnown RBP18.64■□□□□ 0.57
TRIM13-208ENST00000478111 AVPR2P30518 371 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 AK2P54819 239 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 SLFN12Q8IYM2 578 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 URGCPQ8TCY9 931 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 KLHL5Q96PQ7 755 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 PRRX2Q99811 253 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 HSD17B14Q9BPX1 270 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 SMOC2Q9H3U7 446 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 KANSL3Q9P2N6 904 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 SORCS3Q9UPU3 1222 aa18.64■□□□□ 0.57
TRIM13-208ENST00000478111 MTCL1Q9Y4B5 1905 aaKnown RBP18.63■□□□□ 0.57
TRIM13-208ENST00000478111 NRP1O14786 923 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 MARCH6O60337 910 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 TSPAN1O60635 241 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 LARGE1O95461 756 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 EFEMP2O95967 443 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 POMCP01189 267 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 ALDH2P05091 517 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 CNPP09543 421 aaKnown RBP18.63■□□□□ 0.57
TRIM13-208ENST00000478111 PTENP60484 403 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 ATAT1Q5SQI0 421 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 TMC5Q6UXY8 1006 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 ZBTB33Q86T24 672 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 IFNLR1Q8IU57 520 aaPredicted RBP18.63■□□□□ 0.57
TRIM13-208ENST00000478111 TPH2Q8IWU9 490 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 ZDHHC14Q8IZN3 488 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 NECAB1Q8N987 351 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 MTRQ99707 1265 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 EIF2AK1Q9BQI3 630 aaKnown RBP18.63■□□□□ 0.57
TRIM13-208ENST00000478111 EIF2AQ9BY44 585 aaKnown RBP18.63■□□□□ 0.57
TRIM13-208ENST00000478111 MARCH5Q9NX47 278 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 USTQ9Y2C2 406 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 FAN1Q9Y2M0 1017 aa18.63■□□□□ 0.57
TRIM13-208ENST00000478111 WNT7AO00755 349 aa18.62■□□□□ 0.57
TRIM13-208ENST00000478111 INPPL1O15357 1258 aa18.62■□□□□ 0.57
TRIM13-208ENST00000478111 LYPLA2O95372 231 aa18.62■□□□□ 0.57
TRIM13-208ENST00000478111 BAG4O95429 457 aaKnown RBP18.62■□□□□ 0.57
TRIM13-208ENST00000478111 ASGR2P07307 311 aa18.62■□□□□ 0.57
TRIM13-208ENST00000478111 KRT2P35908 639 aa18.62■□□□□ 0.57
TRIM13-208ENST00000478111 CLCN4P51793 760 aa18.62■□□□□ 0.57
TRIM13-208ENST00000478111 ANAPC15P60006 121 aa18.62■□□□□ 0.57
TRIM13-208ENST00000478111 MTMR3Q13615 1198 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms