RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 STK38LQ9Y2H1 464 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 SIGLEC16A6NMB1 481 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 UBE2Q2LH0YL09 131 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 O00370 1275 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 PABPC4LP0CB38 370 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 RASA1P20936 1047 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 CCNFP41002 786 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 CSE1LP55060 971 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 TUBA4AP68366 448 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 KRT83P78385 493 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 PPIDQ08752 370 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 ITGA9Q13797 1035 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 WASHC2DQ5SRD0 308 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 C11orf74Q86VG3 221 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 WDR75Q8IWA0 830 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 ALDH16A1Q8IZ83 802 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 SRPK1Q96SB4 655 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 TANGO6Q9C0B7 1094 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 EPB41L1Q9H4G0 881 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 IL17RBQ9NRM6 502 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 PTTG2Q9NZH5 202 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 SNX12Q9UMY4 172 aa13.59□□□□□ -0.23
RTFDC1-207ENST00000477573 FOCADQ5VW36 1801 aa13.58□□□□□ -0.23
RTFDC1-207ENST00000477573 DDX60LQ5H9U9 1706 aaKnown RBP13.58□□□□□ -0.23
RTFDC1-207ENST00000477573 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 MATN2O00339 956 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 GYPCP04921 128 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 IDEP14735 1019 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 KRT2P35908 639 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 SYKP43405 635 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 CCDC122Q5T0U0 273 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 STRIP1Q5VSL9 837 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 OLFML2BQ68BL8 750 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 SPATA24Q86W54 205 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 BPHLQ86WA6 291 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 FAM186BQ8IYM0 893 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 CERS5Q8N5B7 392 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 MRIQ9BWK5 157 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 NR2E3Q9Y5X4 410 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 MYH7BA7E2Y1 1941 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 CNTNAP5Q8WYK1 1306 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 SERPINB7O75635 380 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 TCP1P17987 556 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 R3HDM1Q15032 1099 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 SRBD1Q8N5C6 995 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 NEDD1Q8NHV4 660 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 NAT14Q8WUY8 206 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 LRRC45Q96CN5 670 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 PHF20Q9BVI0 1012 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 ABCF3Q9NUQ8 709 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 STX8Q9UNK0 236 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 HPSEQ9Y251 543 aa13.58□□□□□ -0.24
RTFDC1-207ENST00000477573 SLX4Q8IY92 1834 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 SMIM31A0A1B0GVY4 71 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 DYTNA2CJ06 578 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 USP17L3A6NCW0 530 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 USP17L4A6NCW7 530 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 CTNND1O60716 968 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 CBFA2T3O75081 653 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 ATP9AO75110 1047 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 VAV1P15498 845 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 ERCC5P28715 1186 aaPredicted RBP13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 RGS2P41220 211 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 CDK7P50613 346 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 TUBA1BP68363 451 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 DCTN2Q13561 401 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 FKBP15Q5T1M5 1219 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 TUBA1AQ71U36 451 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 USP17L1Q7RTZ2 530 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 SLC44A5Q8NCS7 719 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 FBXO41Q8TF61 875 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 UIMC1Q96RL1 719 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 DCLRE1BQ9H816 532 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 DBNDD1Q9H9R9 158 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 PARVBQ9HBI1 364 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 USP40Q9NVE5 1235 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 ATAD3AQ9NVI7 634 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 SEL1LQ9UBV2 794 aa13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 ADD3Q9UEY8 706 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-207ENST00000477573 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 H0YGN5 161 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 ZNF185O15231 689 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 ECE2O60344 883 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 ATP5HO75947 161 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 PYGMP11217 842 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 SCG2P13521 617 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 CHRNA5P30532 468 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 PICALMQ13492 652 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 GRM4Q14833 912 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 PTPAQ15257 358 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 SH3D19Q5HYK7 790 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 APTXQ7Z2E3 356 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 AGGF1Q8N302 714 aaeCLIP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 GIMAP1Q8WWP7 306 aa13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 PURBQ96QR8 312 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-207ENST00000477573 CLK4Q9HAZ1 481 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms