RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MAP4K3Q8IVH8 894 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 NELFCDQ8IXH7 590 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 C7orf61Q8IZ16 206 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 ADSSL1Q8N142 457 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 MLKLQ8NB16 471 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 ANO10Q9NW15 660 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 EXOC7Q9UPT5 735 aa17.78■□□□□ 0.44
VHL-203ENST00000477538 NOC2LQ9Y3T9 749 aaKnown RBP17.78■□□□□ 0.44
VHL-203ENST00000477538 PDCD11Q14690 1871 aaKnown RBP17.78■□□□□ 0.44
VHL-203ENST00000477538 TRIM43BA6NCK2 446 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 PPP1R3GB7ZBB8 358 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 ACKR2O00590 384 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 RPS6KA5O75582 802 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 EDN1P05305 212 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 CCL23P55773 120 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 LPIN1Q14693 890 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 MBTPS1Q14703 1052 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 PCBP1Q15365 356 aaKnown RBP eCLIP17.77■□□□□ 0.44
VHL-203ENST00000477538 AMHR2Q16671 573 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 CATSPER4Q7RTX7 472 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 FAM228AQ86W67 206 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 SYCP3Q8IZU3 236 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 USP38Q8NB14 1042 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 TRIM43Q96BQ3 446 aaPredicted RBP17.77■□□□□ 0.44
VHL-203ENST00000477538 BICD1Q96G01 975 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 PRIMPOLQ96LW4 560 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 FUCA2Q9BTY2 467 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 MRPL4Q9BYD3 311 aaKnown RBP17.77■□□□□ 0.44
VHL-203ENST00000477538 OSBPL7Q9BZF2 842 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 WNT8AQ9H1J5 351 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 TMEM206Q9H813 350 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 DACH1Q9UI36 760 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 SQORQ9Y6N5 450 aa17.77■□□□□ 0.44
VHL-203ENST00000477538 RALGAPA2Q2PPJ7 1873 aa17.77■□□□□ 0.43
VHL-203ENST00000477538 ZMYM2Q9UBW7 1377 aa17.77■□□□□ 0.43
VHL-203ENST00000477538 CNTNAP2Q9UHC6 1331 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 PSMA7O14818 248 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 HNRNPDLO14979 420 aaKnown RBP17.76■□□□□ 0.43
VHL-203ENST00000477538 B4GALT5O43286 388 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 TSPAN1O60635 241 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 PARNO95453 639 aaKnown RBP17.76■□□□□ 0.43
VHL-203ENST00000477538 TIMP1P01033 207 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 RAG1P15918 1043 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 HOXD13P35453 343 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 PAK2Q13177 524 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 PRPF4BQ13523 1007 aaKnown RBP17.76■□□□□ 0.43
VHL-203ENST00000477538 KNOP1Q1ED39 458 aaKnown RBP17.76■□□□□ 0.43
VHL-203ENST00000477538 KLHL10Q6JEL2 608 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 TSHZ1Q6ZSZ6 1077 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 DHTKD1Q96HY7 919 aaPredicted RBP17.76■□□□□ 0.43
VHL-203ENST00000477538 SCLYQ96I15 445 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 AGO3Q9H9G7 860 aaKnown RBP17.76■□□□□ 0.43
VHL-203ENST00000477538 PRKAG2Q9UGJ0 569 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 CTNND2Q9UQB3 1225 aa17.76■□□□□ 0.43
VHL-203ENST00000477538 GPR182O15218 404 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 EVI5O60447 810 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 PIGRP01833 764 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 CD52P31358 61 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 LIG4P49917 911 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 TMEM132AQ24JP5 1023 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 C11orf57Q6ZUT1 292 aaPredicted RBP17.75■□□□□ 0.43
VHL-203ENST00000477538 TARS2Q9BW92 718 aaKnown RBP17.75■□□□□ 0.43
VHL-203ENST00000477538 GBP3Q9H0R5 595 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 IKZF4Q9H2S9 585 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 KCTD10Q9H3F6 313 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 ERVK-5Q9HDB9 667 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 PADI3Q9ULW8 664 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 ST3GAL5Q9UNP4 418 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 USP20Q9Y2K6 914 aa17.75■□□□□ 0.43
VHL-203ENST00000477538 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
VHL-203ENST00000477538 TTLL13PA6NNM8 815 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 RBAK-RBAKDNI3L0D1 243 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 NBNO60934 754 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 ARF4P18085 180 aaPredicted RBP17.74■□□□□ 0.43
VHL-203ENST00000477538 CCNE1P24864 410 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 AXLP30530 894 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 NCBP1Q09161 790 aaKnown RBP17.74■□□□□ 0.43
VHL-203ENST00000477538 NFX1Q12986 1120 aaKnown RBP17.74■□□□□ 0.43
VHL-203ENST00000477538 PAK1Q13153 545 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 ANO6Q4KMQ2 910 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 ATF7IP2Q5U623 682 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 LRSAM1Q6UWE0 723 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 ZPBP2Q6X784 338 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 NELFBQ8WX92 580 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 DPF3Q92784 378 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 P2RX5Q93086 422 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 CPB2Q96IY4 423 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 ACO2Q99798 780 aaKnown RBP17.74■□□□□ 0.43
VHL-203ENST00000477538 ANP32EQ9BTT0 268 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 DNAJC25Q9H1X3 360 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 SEMA6BQ9H3T3 888 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 AGPAT5Q9NUQ2 364 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 TYW1Q9NV66 732 aaKnown RBP17.74■□□□□ 0.43
VHL-203ENST00000477538 TTC3P53804 2025 aa17.74■□□□□ 0.43
VHL-203ENST00000477538 PTPRSQ13332 1948 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 ANKRD63C9JTQ0 380 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 PDXKO00764 312 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 TGFB1I1O43294 461 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 ITGB8P26012 769 aa17.73■□□□□ 0.43
VHL-203ENST00000477538 RFC2P35250 354 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms