RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 OTUD6AQ7L8S5 288 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 MRPL10Q7Z7H8 261 aaKnown RBP12.69□□□□□ -0.38
HDLBP-236ENST00000477477 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 ZNF280BQ86YH2 543 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 SUGP1Q8IWZ8 645 aaKnown RBP12.69□□□□□ -0.38
HDLBP-236ENST00000477477 RNF149Q8NC42 400 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 URGCPQ8TCY9 931 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 TCP11Q8WWU5 503 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 TNFRSF25Q93038 417 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 MTRQ99707 1265 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 VN1R3Q9BXE9 311 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 GBP3Q9H0R5 595 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 RSAD1Q9HA92 442 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 BRMS1Q9HCU9 246 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 DZANK1Q9NVP4 752 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 NR2E1Q9Y466 385 aa12.69□□□□□ -0.38
HDLBP-236ENST00000477477 CNTNAP2Q9UHC6 1331 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 ASAP2O43150 1006 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 BAG4O95429 457 aaKnown RBP12.68□□□□□ -0.38
HDLBP-236ENST00000477477 MTHFRP42898 656 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 MRE11P49959 708 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 AFF1P51825 1210 aaKnown RBP12.68□□□□□ -0.38
HDLBP-236ENST00000477477 PTPN14Q15678 1187 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 RARS2Q5T160 578 aaKnown RBP12.68□□□□□ -0.38
HDLBP-236ENST00000477477 KIAA1841Q6NSI8 718 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 ZBTB33Q86T24 672 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 FBXL6Q8N531 539 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 TMEM87AQ8NBN3 555 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 PRSS33Q8NF86 280 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 SLC22A17Q8WUG5 538 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 XPNPEP1Q9NQW7 623 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 TSHZ2Q9NRE2 1034 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 STK39Q9UEW8 545 aa12.68□□□□□ -0.38
HDLBP-236ENST00000477477 C2CD4DB7Z1M9 353 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 ZBTB39O15060 712 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 DDHD2O94830 711 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 ERLIN2O94905 339 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 SLITRK3O94933 977 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 LYPLA2O95372 231 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 LARGE1O95461 756 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 WEE2P0C1S8 567 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 EPCAMP16422 314 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 NCLP19338 710 aaKnown RBP12.67□□□□□ -0.38
HDLBP-236ENST00000477477 PCBP1Q15365 356 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDLBP-236ENST00000477477 CALCRLQ16602 461 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 ME3Q16798 604 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 IER5LQ5T953 404 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 TPH2Q8IWU9 490 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 C12orf76Q8N812 135 aaPredicted RBP12.67□□□□□ -0.38
HDLBP-236ENST00000477477 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 CNNM3Q8NE01 707 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 GTF3C6Q969F1 213 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 EIF2AK1Q9BQI3 630 aaKnown RBP12.67□□□□□ -0.38
HDLBP-236ENST00000477477 KANSL3Q9P2N6 904 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 ZDBF2Q9HCK1 2354 aa12.67□□□□□ -0.38
HDLBP-236ENST00000477477 TSPAN1O60635 241 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 NEFLP07196 543 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 AXLP30530 894 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 PTPN5P54829 565 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 PTENP60484 403 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 MXD4Q14582 209 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-236ENST00000477477 KANK3Q6NY19 840 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 CABP7Q86V35 215 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 PPFIBP1Q86W92 1011 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-236ENST00000477477 KREMEN2Q8NCW0 462 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 SMG8Q8ND04 991 aaKnown RBP12.66□□□□□ -0.38
HDLBP-236ENST00000477477 NSUN7Q8NE18 718 aaKnown RBP12.66□□□□□ -0.38
HDLBP-236ENST00000477477 CCDC51Q96ER9 411 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 FAM193BQ96PV7 902 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-236ENST00000477477 PRRX2Q99811 253 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 HSD17B14Q9BPX1 270 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 EIF2AQ9BY44 585 aaKnown RBP12.66□□□□□ -0.38
HDLBP-236ENST00000477477 UBN1Q9NPG3 1134 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 ANKEF1Q9NU02 776 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 PCDHA12Q9UN75 941 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 FAN1Q9Y2M0 1017 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 IPPQ9Y573 584 aa12.66□□□□□ -0.38
HDLBP-236ENST00000477477 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 WNT7AO00755 349 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 NRP1O14786 923 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 INPPL1O15357 1258 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 NEMFO60524 1076 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 JAK2O60674 1132 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 LILRB3O75022 631 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 DGAT1O75907 488 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 POMCP01189 267 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 ALDH2P05091 517 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 ITGA4P13612 1032 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 CLCN4P51793 760 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 VCPP55072 806 aaKnown RBP12.65□□□□□ -0.38
HDLBP-236ENST00000477477 POU5F1BQ06416 359 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 MTMR3Q13615 1198 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 CAPSQ13938 189 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 TFDP1Q14186 410 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 AMHR2Q16671 573 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 ATAT1Q5SQI0 421 aa12.65□□□□□ -0.38
HDLBP-236ENST00000477477 NOTUMQ6P988 496 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms