RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 SKIV2LQ15477 1246 aaKnown RBP13.58□□□□□ -0.24
PRKD3-209ENST00000477132 SPOUT1Q5T280 376 aaKnown RBP13.58□□□□□ -0.24
PRKD3-209ENST00000477132 RINT1Q6NUQ1 792 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 AGMOQ6ZNB7 445 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 C1orf186Q6ZWK4 172 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 USP49Q70CQ1 688 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
PRKD3-209ENST00000477132 ABI1Q8IZP0 508 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 LRRC43Q8N309 656 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 SPRYD3Q8NCJ5 442 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 SPPL3Q8TCT6 385 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 CCDC113Q9H0I3 377 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 FBXO2Q9UK22 296 aaPredicted RBP13.58□□□□□ -0.24
PRKD3-209ENST00000477132 HES2Q9Y543 173 aa13.58□□□□□ -0.24
PRKD3-209ENST00000477132 TCF20Q9UGU0 1960 aaKnown RBP13.58□□□□□ -0.24
PRKD3-209ENST00000477132 B4GALT3O60512 393 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 HIP1RO75146 1068 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 OFD1O75665 1012 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 SKIP12755 728 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 MARCKSP29966 332 aaPredicted RBP13.57□□□□□ -0.24
PRKD3-209ENST00000477132 AXLP30530 894 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 IRS1P35568 1242 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 NAMPTP43490 491 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 SLC12A3P55017 1021 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 PCBP1Q15365 356 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRKD3-209ENST00000477132 PTPROQ16827 1216 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 TCEAL5Q5H9L2 206 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 NOTUMQ6P988 496 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 POF1BQ8WVV4 589 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 AK8Q96MA6 479 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 CSRNP2Q9H175 543 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 FZD8Q9H461 694 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 BLOC1S4Q9NUP1 217 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 INPP5FQ9Y2H2 1132 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 IPPQ9Y573 584 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 PCDHGC5Q9Y5F6 944 aa13.57□□□□□ -0.24
PRKD3-209ENST00000477132 BRWD1Q9NSI6 2320 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 FGF18O76093 207 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 LAG3P18627 525 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 NCLP19338 710 aaKnown RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 RAD51AP2Q09MP3 1159 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 FAM187BQ17R55 369 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 TIGD5Q53EQ6 642 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 NAALADL2Q58DX5 795 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 FOXD4L5Q5VV16 416 aaPredicted RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 ADGRD2Q7Z7M1 963 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 ZBTB8OSQ8IWT0 167 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 SYT2Q8N9I0 419 aaPredicted RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 DEPTORQ8TB45 409 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 FOXD4L4Q8WXT5 416 aaPredicted RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 KIFAP3Q92845 792 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 CLIC6Q96NY7 704 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 LMAN2LQ9H0V9 348 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 NXF3Q9H4D5 531 aaKnown RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 ZSCAN16Q9H4T2 348 aaPredicted RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 NSUN3Q9H649 340 aaKnown RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 TBC1D13Q9NVG8 400 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 PRMT7Q9NVM4 692 aaPredicted RBP13.56□□□□□ -0.24
PRKD3-209ENST00000477132 PCDHB12Q9Y5F1 795 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 CNTNAP2Q9UHC6 1331 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 TRIP11Q15643 1979 aa13.56□□□□□ -0.24
PRKD3-209ENST00000477132 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 A0A1B0GUA9 196 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 NPTXRO95502 500 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 SSBP05455 408 aaKnown RBP eCLIP13.55□□□□□ -0.24
PRKD3-209ENST00000477132 PRKCBP05771 671 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 PLA2G4BP0C869 781 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 LIG1P18858 919 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 PLCG1P19174 1290 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 GTF2F1P35269 517 aaKnown RBP eCLIP13.55□□□□□ -0.24
PRKD3-209ENST00000477132 UBA7P41226 1012 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 NPTX2P47972 431 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 PEX3P56589 373 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 PPP2R5AQ15172 486 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 ARSHQ5FYA8 562 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 NOMO2Q5JPE7 1267 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 KCNT2Q6UVM3 1135 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 GLB1LQ6UWU2 654 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 TMEM173Q86WV6 379 aaPredicted RBP13.55□□□□□ -0.24
PRKD3-209ENST00000477132 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 PGBD4Q96DM1 585 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 CCDC51Q96ER9 411 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 CDK5RAP3Q96JB5 506 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 APOL6Q9BWW8 343 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 MRPL9Q9BYD2 267 aaKnown RBP13.55□□□□□ -0.24
PRKD3-209ENST00000477132 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 C2orf40Q9H1Z8 148 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 PDZD7Q9H5P4 517 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 NRDE2Q9H7Z3 1164 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 RSAD1Q9HA92 442 aa13.55□□□□□ -0.24
PRKD3-209ENST00000477132 AAASQ9NRG9 546 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms