RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 FIGNQ5HY92 759 aa15.79■□□□□ 0.12
COL4A6-206ENST00000477085 MFSD14CQ5VZR4 134 aa15.79■□□□□ 0.12
COL4A6-206ENST00000477085 FBXL18Q96ME1 805 aa15.79■□□□□ 0.12
COL4A6-206ENST00000477085 BAG1Q99933 345 aaPredicted RBP15.79■□□□□ 0.12
COL4A6-206ENST00000477085 JPH2Q9BR39 696 aaPredicted RBP15.79■□□□□ 0.12
COL4A6-206ENST00000477085 TARS2Q9BW92 718 aaKnown RBP15.79■□□□□ 0.12
COL4A6-206ENST00000477085 MMRN2Q9H8L6 949 aa15.79■□□□□ 0.12
COL4A6-206ENST00000477085 ABHD10Q9NUJ1 306 aa15.79■□□□□ 0.12
COL4A6-206ENST00000477085 RBAK-RBAKDNI3L0D1 243 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 HAS3O00219 553 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 HNRNPDLO14979 420 aaKnown RBP15.78■□□□□ 0.12
COL4A6-206ENST00000477085 DUSP11O75319 330 aaKnown RBP15.78■□□□□ 0.12
COL4A6-206ENST00000477085 IQCF3P0C7M6 154 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 FECHP22830 423 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 BFSP1Q12934 665 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 TRIM14Q14142 442 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 KIAA0753Q2KHM9 967 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 CBWD6Q4V339 395 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 CBWD3Q5JTY5 395 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 CBWD5Q5RIA9 395 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 TCERG1LQ5VWI1 586 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 RETREG2Q8NC44 543 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 PCMTD1Q96MG8 357 aaPredicted RBP15.78■□□□□ 0.12
COL4A6-206ENST00000477085 AP5M1Q9H0R1 490 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 MINDY3Q9H8M7 445 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 IFT122Q9HBG6 1241 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 SIP14410 1827 aa15.78■□□□□ 0.12
COL4A6-206ENST00000477085 USP27XA6NNY8 438 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 GPR25O00155 361 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 MAGEB2O15479 319 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 SMIM10L2AP0DMW4 78 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 SMIM10L2BP0DMW5 78 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 TRIM21P19474 475 aaKnown RBP15.77■□□□□ 0.12
COL4A6-206ENST00000477085 SLC9A1P19634 815 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 GARTP22102 1010 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 CCND3P30281 292 aaPredicted RBP15.77■□□□□ 0.12
COL4A6-206ENST00000477085 CPT1AP50416 773 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 CHMP4BP1P59074 171 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 PPP2R3AQ06190 1150 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 STRN3Q13033 797 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 KIF22Q14807 665 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 FSCN1Q16658 493 aaKnown RBP15.77■□□□□ 0.12
COL4A6-206ENST00000477085 E4F1Q66K89 784 aaPredicted RBP15.77■□□□□ 0.12
COL4A6-206ENST00000477085 WDR59Q6PJI9 974 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 CNGA4Q8IV77 575 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 LMBR1Q8WVP7 490 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 POMGNT1Q8WZA1 660 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 BICD1Q96G01 975 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 NLRP4Q96MN2 994 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 DNAJC7Q99615 494 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 NUP58Q9BVL2 599 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 SRRDQ9UH36 339 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 PHLPP2Q6ZVD8 1323 aa15.77■□□□□ 0.12
COL4A6-206ENST00000477085 A0A1W2PQJ5 194 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 MAPK13O15264 365 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 VTNP04004 478 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 MYL3P08590 195 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 ACTN1P12814 892 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 SCP2P22307 547 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 PON1P27169 355 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 ABCD1P33897 745 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 LIG4P49917 911 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 GJA9P57773 515 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 ADAM17P78536 824 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 PURAQ00577 322 aaKnown RBP15.77■□□□□ 0.11
COL4A6-206ENST00000477085 MFSD10Q14728 455 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 MTF1Q14872 753 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 NOLC1Q14978 699 aaKnown RBP eCLIP15.77■□□□□ 0.11
COL4A6-206ENST00000477085 SNRNP35Q16560 246 aaKnown RBP15.77■□□□□ 0.11
COL4A6-206ENST00000477085 KIAA0319LQ8IZA0 1049 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 CCDC112Q8NEF3 446 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 BAP1Q92560 729 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 LSM14BQ9BX40 385 aaKnown RBP15.77■□□□□ 0.11
COL4A6-206ENST00000477085 SPTLC3Q9NUV7 552 aa15.77■□□□□ 0.11
COL4A6-206ENST00000477085 LUC7L2Q9Y383 392 aaKnown RBP15.77■□□□□ 0.11
COL4A6-206ENST00000477085 SOWAHDA6NJG2 315 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 ASAP2O43150 1006 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 STX10O60499 249 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 CSDE1O75534 798 aaKnown RBP15.76■□□□□ 0.11
COL4A6-206ENST00000477085 PGK1P00558 417 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 FMO5P49326 533 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 PSEN2P49810 448 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 VAMP7P51809 220 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 EFNA5P52803 228 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 PTENP60484 403 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 MBTD1Q05BQ5 628 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 PPP3CAQ08209 521 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 ZBTB41Q5SVQ8 909 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 CRELD2Q6UXH1 353 aaPredicted RBP15.76■□□□□ 0.11
COL4A6-206ENST00000477085 RAD9BQ6WBX8 426 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 INTS8Q75QN2 995 aaKnown RBP15.76■□□□□ 0.11
COL4A6-206ENST00000477085 OR8K1Q8NGG5 319 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 CCDC51Q96ER9 411 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 MFSD14AQ96MC6 490 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 PPP1R16BQ96T49 567 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 CHP1Q99653 195 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 GANQ9H2C0 597 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 FZD8Q9H461 694 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 SIX2Q9NPC8 291 aa15.76■□□□□ 0.11
COL4A6-206ENST00000477085 A0A087WZ62 844 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms