RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.98
CNTNAP3B-205ENST00000476961 KCTD5Q9NXV2 234 aa8.9□□□□□ -0.98
CNTNAP3B-205ENST00000476961 DDX56Q9NY93 547 aaKnown RBP8.9□□□□□ -0.98
CNTNAP3B-205ENST00000476961 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.9□□□□□ -0.98
CNTNAP3B-205ENST00000476961 MTMR6Q9Y217 621 aa8.9□□□□□ -0.98
CNTNAP3B-205ENST00000476961 RBM8AQ9Y5S9 174 aaKnown RBP8.9□□□□□ -0.98
CNTNAP3B-205ENST00000476961 SNX14Q9Y5W7 946 aa8.9□□□□□ -0.98
CNTNAP3B-205ENST00000476961 TCRBV5S4A2TA0A5A2 114 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 C19orf81C9J6K1 198 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 UFL1O94874 794 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 NR1D1P20393 614 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CHRNA5P30532 468 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 THOP1P52888 689 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 NLRP12P59046 1061 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 KRT85P78386 507 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 PDE4DQ08499 809 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 HLTFQ14527 1009 aaKnown RBP eCLIP8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 GLE1Q53GS7 698 aaKnown RBP8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 SLC9C2Q5TAH2 1124 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 SNX30Q5VWJ9 437 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 C15orf52Q6ZUT6 534 aaKnown RBP8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 PAF1Q8N7H5 531 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 FERD3LQ96RJ6 166 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 PUS7LQ9H0K6 701 aaKnown RBP8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 XAB2Q9HCS7 855 aaKnown RBP8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CTTNBP2NLQ9P2B4 639 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 POLLQ9UGP5 575 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 ZMYND8Q9ULU4 1186 aaPredicted RBP8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 LRRC37AA6NMS7 1700 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 GOLGA8IPA6NC78 632 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 GOLGA8CPA6NN73 597 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 H0YIN7 160 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 TRAPPC3O43617 180 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 STAMBPO95630 424 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 ETS2P15036 469 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 PDE6AP16499 860 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 ATP2B4P23634 1241 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 HOXC13P31276 330 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 HSD17B4P51659 736 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 KCNJ2P63252 427 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 UBE3CQ15386 1083 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CDONQ4KMG0 1287 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 NCAPH2Q6IBW4 605 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 SNRNP48Q6IEG0 339 aaKnown RBP8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 Q6ZNX1 250 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 TRIM67Q6ZTA4 783 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 TOGARAM2Q6ZUX3 1019 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 SNX32Q86XE0 403 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 SLC38A6Q8IZM9 456 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 TBC1D16Q8TBP0 767 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 DNAJC9Q8WXX5 260 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 GGA1Q9UJY5 639 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 DENND2AQ9ULE3 1009 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CFL2Q9Y281 166 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 LRCH1Q9Y2L9 728 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 IVNS1ABPQ9Y6Y0 642 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 ZNF532Q9HCE3 1301 aa8.89□□□□□ -0.99
CNTNAP3B-205ENST00000476961 SEMA3EO15041 775 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 NCK2O43639 380 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 ACSL4O60488 711 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 TJP3O95049 919 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 RBP3P10745 1247 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 ALAS1P13196 640 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 NAGAP17050 411 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 KCNA3P22001 575 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 ATP11AP98196 1134 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 IKQ13123 557 aaPredicted RBP8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CYLC2Q14093 348 aaPredicted RBP8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 KARSQ15046 597 aaKnown RBP8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 INSCQ1MX18 579 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 STYK1Q6J9G0 422 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 NEK5Q6P3R8 708 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CCDC62Q6P9F0 684 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 LRRC8BQ6P9F7 803 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 RHOT2Q8IXI1 618 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CADM3Q8N126 398 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 FBF1Q8TES7 1133 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 PPP1R12CQ9BZL4 782 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 C12orf10Q9HB07 376 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 POLD4Q9HCU8 107 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 VTA1Q9NP79 307 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 PPANQ9NQ55 473 aaKnown RBP8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 PPP1R1BQ9UD71 204 aaPredicted RBP8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 C10orf71Q711Q0 1435 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 MYO5AQ9Y4I1 1855 aaKnown RBP8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CTAGE9A4FU28 777 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 FOXP2O15409 715 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 NMT2O60551 498 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CBFA2T3O75081 653 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 ZBTB7AO95365 584 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CDK4P11802 303 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CPA3P15088 417 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 CTRB1P17538 263 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 KRT4P19013 534 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 SERPINB3P29508 390 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 WEE1P30291 646 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 GBP1P32455 592 aa8.88□□□□□ -0.99
CNTNAP3B-205ENST00000476961 TXKP42681 527 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms