RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 KREMEN2Q8NCW0 462 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 PSPC1Q8WXF1 523 aaKnown RBP14.67□□□□□ -0.06
MRPL55-228ENST00000476267 TMEM143Q96AN5 459 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 CEP170P1Q96L14 293 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 XPNPEP1Q9NQW7 623 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 SORCS3Q9UPU3 1222 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 INPP5FQ9Y2H2 1132 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 PLXNA3P51805 1871 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 ZBTB39O15060 712 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 INPPL1O15357 1258 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 GAS2O43903 313 aaKnown RBP14.66□□□□□ -0.06
MRPL55-228ENST00000476267 CCNT1O60563 726 aaKnown RBP14.66□□□□□ -0.06
MRPL55-228ENST00000476267 CDKL5O76039 1030 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 BRD1O95696 1058 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 FDPSP14324 419 aaKnown RBP14.66□□□□□ -0.06
MRPL55-228ENST00000476267 NCLP19338 710 aaKnown RBP14.66□□□□□ -0.06
MRPL55-228ENST00000476267 AVPR2P30518 371 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 YWHABP31946 246 aaKnown RBP14.66□□□□□ -0.06
MRPL55-228ENST00000476267 LAMTOR4Q0VGL1 99 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 EMC2Q15006 297 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 RARS2Q5T160 578 aaKnown RBP14.66□□□□□ -0.06
MRPL55-228ENST00000476267 FERMT3Q86UX7 667 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 EXOC8Q8IYI6 725 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 RNF168Q8IYW5 571 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-228ENST00000476267 ZDHHC14Q8IZN3 488 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 SMG8Q8ND04 991 aaKnown RBP14.66□□□□□ -0.06
MRPL55-228ENST00000476267 PGBD4Q96DM1 585 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 RIPOR3Q96MK2 946 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 SMOC2Q9H3U7 446 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 RSAD1Q9HA92 442 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 MARCH5Q9NX47 278 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 RGL1Q9NZL6 768 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
MRPL55-228ENST00000476267 SRGAP2CP0DJJ0 459 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 CLCN4P51793 760 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 MTMR3Q13615 1198 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 BMS1Q14692 1282 aaKnown RBP14.65□□□□□ -0.06
MRPL55-228ENST00000476267 IFNLR1Q8IU57 520 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-228ENST00000476267 UBALD2Q8IYN6 164 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 DYDC2Q96IM9 177 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 NAP1L4Q99733 375 aaKnown RBP14.65□□□□□ -0.06
MRPL55-228ENST00000476267 TMEM175Q9BSA9 504 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 TSHZ2Q9NRE2 1034 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 BMP2KQ9NSY1 1161 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-228ENST00000476267 USTQ9Y2C2 406 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 PIEZO1Q92508 2521 aa14.65□□□□□ -0.06
MRPL55-228ENST00000476267 TDRD15B5MCY1 1934 aaKnown RBP14.64□□□□□ -0.07
MRPL55-228ENST00000476267 NRP1O14786 923 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 ASAP2O43150 1006 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 TSPAN1O60635 241 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 SLITRK3O94933 977 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 LYPLA2O95372 231 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 CNPP09543 421 aaKnown RBP14.64□□□□□ -0.07
MRPL55-228ENST00000476267 CA8P35219 290 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 RNASELQ05823 741 aaKnown RBP14.64□□□□□ -0.07
MRPL55-228ENST00000476267 DSC1Q08554 894 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 NR5A1Q13285 461 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 CTTNQ14247 550 aaKnown RBP14.64□□□□□ -0.07
MRPL55-228ENST00000476267 RNF149Q8NC42 400 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 URGCPQ8TCY9 931 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 TCP11Q8WWU5 503 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 KLHL5Q96PQ7 755 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 HSD17B14Q9BPX1 270 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 GBP3Q9H0R5 595 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 SLKQ9H2G2 1235 aaPredicted RBP14.64□□□□□ -0.07
MRPL55-228ENST00000476267 ZSWIM4Q9H7M6 989 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 SFXN1Q9H9B4 322 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 STK39Q9UEW8 545 aa14.64□□□□□ -0.07
MRPL55-228ENST00000476267 WNT7AO00755 349 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 LARGE1O95461 756 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 POMCP01189 267 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 ASGR2P07307 311 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 XBP1P17861 261 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 NUBP1P53384 320 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 PTENP60484 403 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 CYP4A11Q02928 519 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 POU5F1BQ06416 359 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 PCBP1Q15365 356 aaKnown RBP eCLIP14.63□□□□□ -0.07
MRPL55-228ENST00000476267 AMHR2Q16671 573 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 NCAPH2Q6IBW4 605 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 TMC5Q6UXY8 1006 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 GPR149Q86SP6 731 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 PPFIBP1Q86W92 1011 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 COLGALT2Q8IYK4 626 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 SLFN12Q8IYM2 578 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 CNNM3Q8NE01 707 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 MTRQ99707 1265 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 EIF2AQ9BY44 585 aaKnown RBP14.63□□□□□ -0.07
MRPL55-228ENST00000476267 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 KANSL3Q9P2N6 904 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 IPPQ9Y573 584 aa14.63□□□□□ -0.07
MRPL55-228ENST00000476267 PAPLNO95428 1278 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 SOD2P04179 222 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 AXLP30530 894 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 AK2P54819 239 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 ANAPC15P60006 121 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 MBTD1Q05BQ5 628 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 CAPSQ13938 189 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 XKR9Q5GH70 373 aa14.62□□□□□ -0.07
MRPL55-228ENST00000476267 ATAT1Q5SQI0 421 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms