RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 NR2E1Q9Y466 385 aa8.08□□□□□ -1.12
UBE4B-208ENST00000475795 HCFC2Q9Y5Z7 792 aa8.08□□□□□ -1.12
UBE4B-208ENST00000475795 CYP46A1Q9Y6A2 500 aa8.08□□□□□ -1.12
UBE4B-208ENST00000475795 PLXNA3P51805 1871 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 DDX11L8A8MPP1 907 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 NT5C1B-RDH14C9J2C7 533 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 EML1O00423 815 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 SLC37A4O43826 429 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 ZNF623O75123 536 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 ZC3H11AO75152 810 aaKnown RBP eCLIP8.07□□□□□ -1.12
UBE4B-208ENST00000475795 CXCL14O95715 111 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 SP100P23497 879 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-208ENST00000475795 RAB27AP51159 221 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 POLGP54098 1239 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-208ENST00000475795 PTPN5P54829 565 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 ITIH3Q06033 890 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 STK3Q13188 491 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 PPP2R5CQ13362 524 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 GIT2Q14161 759 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 INF2Q27J81 1249 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 NOMO2Q5JPE7 1267 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 PLA2G4FQ68DD2 849 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 CES5AQ6NT32 575 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 CPLX2Q6PUV4 134 aaKnown RBP8.07□□□□□ -1.12
UBE4B-208ENST00000475795 GLB1LQ6UWU2 654 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 ANO5Q75V66 913 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 CATSPER4Q7RTX7 472 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 DDX53Q86TM3 631 aaKnown RBP8.07□□□□□ -1.12
UBE4B-208ENST00000475795 TMEM173Q86WV6 379 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-208ENST00000475795 KSR1Q8IVT5 923 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 VPS52Q8N1B4 723 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 LPPQ93052 612 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 IGSF21Q96ID5 467 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 FAM20AQ96MK3 541 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 NLRP4Q96MN2 994 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 JPH2Q9BR39 696 aaPredicted RBP8.07□□□□□ -1.12
UBE4B-208ENST00000475795 TM6SF1Q9BZW5 370 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 ADAM7Q9H2U9 754 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 POMKQ9H5K3 350 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 NRDE2Q9H7Z3 1164 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 CYP26B1Q9NR63 512 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 FAM105AQ9NUU6 356 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 TBC1D13Q9NVG8 400 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 CDH22Q9UJ99 828 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 VAV3Q9UKW4 847 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 PIN4Q9Y237 131 aaKnown RBP8.07□□□□□ -1.12
UBE4B-208ENST00000475795 IRAK3Q9Y616 596 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 DOCK8Q8NF50 2099 aa8.07□□□□□ -1.12
UBE4B-208ENST00000475795 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.06□□□□□ -1.12
UBE4B-208ENST00000475795 MEIS3P2A8K0S8 358 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 C2CD4DB7Z1M9 353 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 DKC1O60832 514 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBE4B-208ENST00000475795 OFD1O75665 1012 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 P4HBP07237 508 aaKnown RBP8.06□□□□□ -1.12
UBE4B-208ENST00000475795 GALTP07902 379 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 CTSAP10619 480 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 CA8P35219 290 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 MTHFRP42898 656 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 QARSP47897 775 aaKnown RBP8.06□□□□□ -1.12
UBE4B-208ENST00000475795 VCPP55072 806 aaKnown RBP8.06□□□□□ -1.12
UBE4B-208ENST00000475795 NPEPPSP55786 919 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 LSM11P83369 360 aaKnown RBP eCLIP8.06□□□□□ -1.12
UBE4B-208ENST00000475795 TCF15Q12870 199 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 LETM2Q2VYF4 491 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 LONRF3Q496Y0 759 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 PPP4R3AQ6IN85 833 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 ZBTB33Q86T24 672 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 EXOC8Q8IYI6 725 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 BCL7CQ8WUZ0 217 aaPredicted RBP8.06□□□□□ -1.12
UBE4B-208ENST00000475795 AUTS2Q8WXX7 1259 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 PGBD4Q96DM1 585 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 RIPOR3Q96MK2 946 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 PHOX2BQ99453 314 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 PHF20Q9BVI0 1012 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 DHX33Q9H6R0 707 aaKnown RBP8.06□□□□□ -1.12
UBE4B-208ENST00000475795 IFT122Q9HBG6 1241 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 KCNMB3Q9NPA1 279 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 AGPAT5Q9NUQ2 364 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 DZANK1Q9NVP4 752 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 KCNJ14Q9UNX9 436 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 INPP5FQ9Y2H2 1132 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 PPME1Q9Y570 386 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 PCDHB2Q9Y5E7 798 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 COL4A3BPQ9Y5P4 624 aa8.06□□□□□ -1.12
UBE4B-208ENST00000475795 STK36Q9NRP7 1315 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 CCDC194A0A1B0GVG4 234 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 TBX3O15119 743 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 B4GALT3O60512 393 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 CDKL5O76039 1030 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 GCFC2P16383 781 aaKnown RBP8.05□□□□□ -1.12
UBE4B-208ENST00000475795 EPCAMP16422 314 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 AVPR2P30518 371 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 RFC5P40937 340 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 SLC11A1P49279 550 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 RNASELQ05823 741 aaKnown RBP8.05□□□□□ -1.12
UBE4B-208ENST00000475795 SCRN1Q12765 414 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 MTMR3Q13615 1198 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 PTPN14Q15678 1187 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms