RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 DEFB118Q96PH6 123 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 MAGEC2Q9UBF1 373 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-217ENST00000475693 PPME1Q9Y570 386 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 COL1A2P08123 1366 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 INO80B-WBP1J3KQ70 363 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 HNRNPDLO14979 420 aaKnown RBP19.8■□□□□ 0.76
ATG4B-217ENST00000475693 CETN3O15182 167 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 ACLYP53396 1101 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 NR1I3Q14994 352 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 PPP2R5AQ15172 486 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 EDRF1Q3B7T1 1238 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 CCDC40Q4G0X9 1142 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 SEZ6Q53EL9 994 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 HS2ST1Q7LGA3 356 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 NLRP7Q8WX94 980 aa19.8■□□□□ 0.76
ATG4B-217ENST00000475693 INO80BQ9C086 356 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-217ENST00000475693 RRN3P2A6NIE6 340 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 N4BP3O15049 544 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 GOLGA8FQ08AF8 430 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 GOLGA8DPQ0D2H9 430 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 MIIPQ5JXC2 388 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 RNF180Q86T96 592 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 FAM84AQ96KN4 292 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 JPH2Q9BR39 696 aaPredicted RBP19.79■□□□□ 0.76
ATG4B-217ENST00000475693 KATNAL1Q9BW62 490 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 RNF208Q9H0X6 261 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 TMEM206Q9H813 350 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 A0A1B0GTH6 734 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 MBLAC1A4D2B0 266 aaPredicted RBP19.79■□□□□ 0.76
ATG4B-217ENST00000475693 HARSP12081 509 aaKnown RBP19.79■□□□□ 0.76
ATG4B-217ENST00000475693 TMOD1P28289 359 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 NKX3-2P78367 333 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 ARID5BQ14865 1188 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 ZC3H3Q8IXZ2 948 aaKnown RBP19.79■□□□□ 0.76
ATG4B-217ENST00000475693 SCLT1Q96NL6 688 aa19.79■□□□□ 0.76
ATG4B-217ENST00000475693 CCDC94Q9BW85 323 aaPredicted RBP19.79■□□□□ 0.76
ATG4B-217ENST00000475693 UBE4BO95155 1302 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 SCN10AQ9Y5Y9 1956 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 LRRC10BA6NIK2 292 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 GAS2O43903 313 aaKnown RBP19.78■□□□□ 0.76
ATG4B-217ENST00000475693 ZEB2O60315 1214 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 MSCO60682 206 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 STRN3Q13033 797 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 ARMCX5Q6P1M9 558 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 FILIP1Q7Z7B0 1213 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 CTAGE1Q96RT6 745 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 NOC4LQ9BVI4 516 aaKnown RBP19.78■□□□□ 0.76
ATG4B-217ENST00000475693 CCDC113Q9H0I3 377 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 DMAC2Q9NW81 257 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 HSPBP1Q9NZL4 362 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 ANKFY1Q9P2R3 1169 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 EXOC3O60645 756 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 HSPA1AP0DMV8 641 aaKnown RBP19.78■□□□□ 0.76
ATG4B-217ENST00000475693 HSPA1BP0DMV9 641 aaKnown RBP19.78■□□□□ 0.76
ATG4B-217ENST00000475693 CCL5P13501 91 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 EEF1GP26641 437 aaKnown RBP19.78■□□□□ 0.76
ATG4B-217ENST00000475693 KLK7P49862 253 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 GPC3P51654 580 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 PTENP60484 403 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 MBTD1Q05BQ5 628 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 ZBTB41Q5SVQ8 909 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 CDCA2Q69YH5 1023 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-217ENST00000475693 PPP4R3CPQ6ZMV5 832 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 TMC6Q7Z403 805 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 ZBTB33Q86T24 672 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 EXOC8Q8IYI6 725 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 MRFAP1L1Q96HT8 127 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 ZNF830Q96NB3 372 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-217ENST00000475693 OSMRQ99650 979 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 TRMT13Q9NUP7 481 aaKnown RBP19.78■□□□□ 0.76
ATG4B-217ENST00000475693 GTF2IRD1Q9UHL9 959 aa19.78■□□□□ 0.76
ATG4B-217ENST00000475693 LIG4P49917 911 aa19.77■□□□□ 0.76
ATG4B-217ENST00000475693 ALCAMQ13740 583 aa19.77■□□□□ 0.76
ATG4B-217ENST00000475693 POMGNT1Q8WZA1 660 aa19.77■□□□□ 0.76
ATG4B-217ENST00000475693 KPNA6O60684 536 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 PRKCBP05771 671 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 CST5P28325 142 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-217ENST00000475693 UBXN1Q04323 297 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 CBWD2Q8IUF1 395 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 TMEM40Q8WWA1 233 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 CPB2Q96IY4 423 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 CEP63Q96MT8 703 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 OSBPL7Q9BZF2 842 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 ADAMTS10Q9H324 1103 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 MMRN2Q9H8L6 949 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 GPR32O75388 356 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 HOXC8P31273 242 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 DLG4P78352 724 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 ITGA7Q13683 1181 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 DCAF17Q5H9S7 520 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-217ENST00000475693 PCSK9Q8NBP7 692 aaKnown RBP19.76■□□□□ 0.75
ATG4B-217ENST00000475693 SLC17A8Q8NDX2 589 aa19.76■□□□□ 0.75
ATG4B-217ENST00000475693 ADRB2P07550 413 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 TRIM49P0CI25 452 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 TRIM49CP0CI26 452 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 RPL13P26373 211 aaKnown RBP19.75■□□□□ 0.75
ATG4B-217ENST00000475693 MATR3P43243 847 aaKnown RBP eCLIP19.75■□□□□ 0.75
ATG4B-217ENST00000475693 ACOT2P49753 483 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 APBA1Q02410 837 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 TFDP1Q14186 410 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms