RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SRGAP1Q7Z6B7 1085 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 DIS3L2Q8IYB7 885 aaKnown RBP7.84□□□□□ -1.15
HDAC3-207ENST00000475549 C12orf76Q8N812 135 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-207ENST00000475549 GSTCDQ8NEC7 633 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 SLC22A17Q8WUG5 538 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 PSPC1Q8WXF1 523 aaKnown RBP7.84□□□□□ -1.15
HDAC3-207ENST00000475549 ASIC4Q96FT7 647 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 FBXL18Q96ME1 805 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 KIF2CQ99661 725 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 JPH2Q9BR39 696 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-207ENST00000475549 EIF2AQ9BY44 585 aaKnown RBP7.84□□□□□ -1.15
HDAC3-207ENST00000475549 MRPL9Q9BYD2 267 aaKnown RBP7.84□□□□□ -1.15
HDAC3-207ENST00000475549 ZBP1Q9H171 429 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 TTC12Q9H892 705 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-207ENST00000475549 MIOSQ9NXC5 875 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 PCDHA12Q9UN75 941 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 HES2Q9Y543 173 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 PPME1Q9Y570 386 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 KAT6AQ92794 2004 aa7.84□□□□□ -1.15
HDAC3-207ENST00000475549 ATG2AQ2TAZ0 1938 aa7.84□□□□□ -1.16
HDAC3-207ENST00000475549 NLRC5Q86WI3 1866 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 TMEM221A6NGB7 291 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 TTLL13PA6NNM8 815 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 M0R296 226 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 B4GALT5O43286 388 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 TSPAN1O60635 241 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 POMCP01189 267 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 CTSAP10619 480 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 SKIP12755 728 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 EPCAMP16422 314 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 HOXB8P17481 243 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-207ENST00000475549 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
HDAC3-207ENST00000475549 GLRA2P23416 452 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 TXKP42681 527 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 RARRES1P49788 294 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 RAB27AP51159 221 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 MBTD1Q05BQ5 628 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 CAPSQ13938 189 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 PTPN14Q15678 1187 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 CALCRLQ16602 461 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 OTUD6AQ7L8S5 288 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 BMP8AQ7Z5Y6 402 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 CATSPER3Q86XQ3 398 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 IFNLR1Q8IU57 520 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-207ENST00000475549 EXOC8Q8IYI6 725 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 COLGALT2Q8IYK4 626 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 SLFN12Q8IYM2 578 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 PIGOQ8TEQ8 1089 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 WASF1Q92558 559 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 TMEM169Q96HH4 297 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 CPB2Q96IY4 423 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 NAP1L4Q99733 375 aaKnown RBP7.83□□□□□ -1.16
HDAC3-207ENST00000475549 GBP3Q9H0R5 595 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 SMOC2Q9H3U7 446 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 POMKQ9H5K3 350 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 RSAD1Q9HA92 442 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 ANKEF1Q9NU02 776 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 MARCH5Q9NX47 278 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 IPPQ9Y573 584 aa7.83□□□□□ -1.16
HDAC3-207ENST00000475549 MUC6Q6W4X9 2439 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 FSD2A1L4K1 749 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 ARL5CA6NH57 179 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 POTEMA6NI47 508 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 C2CD4DB7Z1M9 353 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 NRP1O14786 923 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 INPPL1O15357 1258 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 ASAP2O43150 1006 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 MARCH6O60337 910 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 DKC1O60832 514 aaKnown RBP eCLIP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 MED24O75448 989 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 DGAT1O75907 488 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 BAG4O95429 457 aaKnown RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 PDGFBP01127 241 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 ALDH2P05091 517 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 SSBP05455 408 aaKnown RBP eCLIP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 CNPP09543 421 aaKnown RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 ARF4P18085 180 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 ATP2B1P20020 1258 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 MCM7P33993 719 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 GUCY1B3Q02153 619 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 NHLH1Q02575 133 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 RNASELQ05823 741 aaKnown RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 ITIH3Q06033 890 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 POU5F1BQ06416 359 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 DSC1Q08554 894 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 MXD4Q14582 209 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 FNDC1Q4ZHG4 1894 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 CDR2LQ86X02 465 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 RNF168Q8IYW5 571 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-207ENST00000475549 C4orf32Q8N8J7 132 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 TCP11Q8WWU5 503 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 CASP10Q92851 521 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 PBXIP1Q96AQ6 731 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 PGBD4Q96DM1 585 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 ZFP42Q96MM3 310 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 KLHL5Q96PQ7 755 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 GAD1Q99259 594 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 PHOX2BQ99453 314 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 MTRQ99707 1265 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms