RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 PPFIBP1Q86W92 1011 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 EXOC8Q8IYI6 725 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 ZDHHC14Q8IZN3 488 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 PRPF31Q8WWY3 499 aaKnown RBP27.85■■■□□ 2.05
TMEM54-205ENST00000475208 RSAD1Q9HA92 442 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 PDRG1Q9NUG6 133 aa27.85■■■□□ 2.05
TMEM54-205ENST00000475208 MYO10Q9HD67 2058 aa27.84■■■□□ 2.05
TMEM54-205ENST00000475208 DDHD2O94830 711 aa27.84■■■□□ 2.05
TMEM54-205ENST00000475208 AFF1P51825 1210 aaKnown RBP27.84■■■□□ 2.05
TMEM54-205ENST00000475208 MRPL10Q7Z7H8 261 aaKnown RBP27.84■■■□□ 2.05
TMEM54-205ENST00000475208 FEZF2Q8TBJ5 459 aa27.84■■■□□ 2.05
TMEM54-205ENST00000475208 LXNQ9BS40 222 aa27.84■■■□□ 2.05
TMEM54-205ENST00000475208 IRF2BPLQ9H1B7 796 aa27.84■■■□□ 2.05
TMEM54-205ENST00000475208 USTQ9Y2C2 406 aa27.84■■■□□ 2.05
TMEM54-205ENST00000475208 CNTNAP2Q9UHC6 1331 aa27.84■■■□□ 2.05
TMEM54-205ENST00000475208 USP34Q70CQ2 3546 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 CCNT1O60563 726 aaKnown RBP27.83■■■□□ 2.05
TMEM54-205ENST00000475208 CDKL5O76039 1030 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 SSBP05455 408 aaKnown RBP eCLIP27.83■■■□□ 2.05
TMEM54-205ENST00000475208 LAMTOR4Q0VGL1 99 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 SCRN1Q12765 414 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 UBXN11Q5T124 520 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 PLCD3Q8N3E9 789 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 HAS1Q92839 578 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 ATOH1Q92858 354 aaPredicted RBP27.83■■■□□ 2.05
TMEM54-205ENST00000475208 FAM193BQ96PV7 902 aaPredicted RBP27.83■■■□□ 2.05
TMEM54-205ENST00000475208 EMILIN2Q9BXX0 1053 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 SFXN1Q9H9B4 322 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 STK39Q9UEW8 545 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 LIMD1Q9UGP4 676 aa27.83■■■□□ 2.05
TMEM54-205ENST00000475208 DENND4AQ7Z401 1863 aa27.83■■■□□ 2.04
TMEM54-205ENST00000475208 SPDYE4A6NLX3 237 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 HOXA11P31270 313 aaPredicted RBP27.82■■■□□ 2.04
TMEM54-205ENST00000475208 YWHABP31946 246 aaKnown RBP27.82■■■□□ 2.04
TMEM54-205ENST00000475208 NUBP1P53384 320 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 EMC2Q15006 297 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 EPHA7Q15375 998 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 PIK3AP1Q6ZUJ8 805 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 C4orf19Q8IY42 314 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 KLHL5Q96PQ7 755 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 TMEM175Q9BSA9 504 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 RGL1Q9NZL6 768 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 KANSL3Q9P2N6 904 aa27.82■■■□□ 2.04
TMEM54-205ENST00000475208 TBX3O15119 743 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 GAS2O43903 313 aaKnown RBP27.81■■■□□ 2.04
TMEM54-205ENST00000475208 MARCH6O60337 910 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 XBP1P17861 261 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 KLRC2P26717 231 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 NCAPH2Q6IBW4 605 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 RNF149Q8NC42 400 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 OXER1Q8TDS5 423 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 TCP11Q8WWU5 503 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 GJB4Q9NTQ9 266 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 FAN1Q9Y2M0 1017 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 STK36Q9NRP7 1315 aa27.81■■■□□ 2.04
TMEM54-205ENST00000475208 H0Y858 1186 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 GALR2O43603 387 aaPredicted RBP27.8■■■□□ 2.04
TMEM54-205ENST00000475208 ST18O60284 1047 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 POMCP01189 267 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 ALDH2P05091 517 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 CNPP09543 421 aaKnown RBP27.8■■■□□ 2.04
TMEM54-205ENST00000475208 NCLP19338 710 aaKnown RBP27.8■■■□□ 2.04
TMEM54-205ENST00000475208 CLCN4P51793 760 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 OTUD6AQ7L8S5 288 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 GPR149Q86SP6 731 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 FERMT3Q86UX7 667 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 POTEDQ86YR6 584 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 DYDC2Q96IM9 177 aa27.8■■■□□ 2.04
TMEM54-205ENST00000475208 NAP1L4Q99733 375 aaKnown RBP27.8■■■□□ 2.04
TMEM54-205ENST00000475208 NRP1O14786 923 aa27.79■■■□□ 2.04
TMEM54-205ENST00000475208 GFRA3O60609 400 aa27.79■■■□□ 2.04
TMEM54-205ENST00000475208 DTNBO60941 627 aa27.79■■■□□ 2.04
TMEM54-205ENST00000475208 ERLIN2O94905 339 aa27.79■■■□□ 2.04
TMEM54-205ENST00000475208 CTTNQ14247 550 aaKnown RBP27.79■■■□□ 2.04
TMEM54-205ENST00000475208 XKR9Q5GH70 373 aa27.79■■■□□ 2.04
TMEM54-205ENST00000475208 CCDC149Q6ZUS6 474 aa27.79■■■□□ 2.04
TMEM54-205ENST00000475208 TMEM105Q8N8V8 129 aa27.79■■■□□ 2.04
TMEM54-205ENST00000475208 MRPL17Q9NRX2 175 aaKnown RBP27.79■■■□□ 2.04
TMEM54-205ENST00000475208 ARID2Q68CP9 1835 aa27.78■■■□□ 2.04
TMEM54-205ENST00000475208 ASAP2O43150 1006 aa27.78■■■□□ 2.04
TMEM54-205ENST00000475208 LILRB3O75022 631 aa27.78■■■□□ 2.04
TMEM54-205ENST00000475208 CYP4A11Q02928 519 aa27.78■■■□□ 2.04
TMEM54-205ENST00000475208 EARS2Q5JPH6 523 aaKnown RBP27.78■■■□□ 2.04
TMEM54-205ENST00000475208 SMG8Q8ND04 991 aaKnown RBP27.78■■■□□ 2.04
TMEM54-205ENST00000475208 ACSF2Q96CM8 615 aaPredicted RBP27.78■■■□□ 2.04
TMEM54-205ENST00000475208 MTRQ99707 1265 aa27.78■■■□□ 2.04
TMEM54-205ENST00000475208 ZSWIM4Q9H7M6 989 aa27.78■■■□□ 2.04
TMEM54-205ENST00000475208 PRG3Q9Y2Y8 225 aaPredicted RBP27.78■■■□□ 2.04
TMEM54-205ENST00000475208 ZBTB39O15060 712 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 URODP06132 367 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 ITGA4P13612 1032 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 SPIRE1Q08AE8 756 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 CNNM3Q8NE01 707 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 HERC2P3Q9BVR0 1158 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 UBN1Q9NPG3 1134 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 MARCH5Q9NX47 278 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 IPPQ9Y573 584 aa27.77■■■□□ 2.04
TMEM54-205ENST00000475208 C2CD2LO14523 706 aa27.76■■■□□ 2.03
TMEM54-205ENST00000475208 TSPAN1O60635 241 aa27.76■■■□□ 2.03
TMEM54-205ENST00000475208 SOD2P04179 222 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms