RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
SRRT-209ENST00000474896 MRPL10Q7Z7H8 261 aaKnown RBP17.48■□□□□ 0.39
SRRT-209ENST00000474896 PRPF31Q8WWY3 499 aaKnown RBP17.48■□□□□ 0.39
SRRT-209ENST00000474896 SLC7A3Q8WY07 619 aa17.48■□□□□ 0.39
SRRT-209ENST00000474896 TMEM143Q96AN5 459 aa17.48■□□□□ 0.39
SRRT-209ENST00000474896 ZNF274Q96GC6 653 aaPredicted RBP17.48■□□□□ 0.39
SRRT-209ENST00000474896 CEP170P1Q96L14 293 aa17.48■□□□□ 0.39
SRRT-209ENST00000474896 FAM193BQ96PV7 902 aaPredicted RBP17.48■□□□□ 0.39
SRRT-209ENST00000474896 EMILIN2Q9BXX0 1053 aa17.48■□□□□ 0.39
SRRT-209ENST00000474896 AGPAT5Q9NUQ2 364 aa17.48■□□□□ 0.39
SRRT-209ENST00000474896 FAN1Q9Y2M0 1017 aa17.48■□□□□ 0.39
SRRT-209ENST00000474896 USP34Q70CQ2 3546 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 P4HBP07237 508 aaKnown RBP17.47■□□□□ 0.39
SRRT-209ENST00000474896 CNPP09543 421 aaKnown RBP17.47■□□□□ 0.39
SRRT-209ENST00000474896 HOXA11P31270 313 aaPredicted RBP17.47■□□□□ 0.39
SRRT-209ENST00000474896 CLCN4P51793 760 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 STK3Q13188 491 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 KRT25Q7Z3Z0 450 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 SRGAP1Q7Z6B7 1085 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 GPR149Q86SP6 731 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 EXOC8Q8IYI6 725 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 ACSF2Q96CM8 615 aaPredicted RBP17.47■□□□□ 0.39
SRRT-209ENST00000474896 FAM20AQ96MK3 541 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 MFSD1Q9H3U5 465 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 MINDY3Q9H8M7 445 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 SFXN1Q9H9B4 322 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 RSAD1Q9HA92 442 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 STK39Q9UEW8 545 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 KCNJ14Q9UNX9 436 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
SRRT-209ENST00000474896 NRP1O14786 923 aa17.46■□□□□ 0.39
SRRT-209ENST00000474896 DKC1O60832 514 aaKnown RBP eCLIP17.46■□□□□ 0.39
SRRT-209ENST00000474896 LILRB3O75022 631 aa17.46■□□□□ 0.39
SRRT-209ENST00000474896 POMCP01189 267 aa17.46■□□□□ 0.39
SRRT-209ENST00000474896 LAMTOR4Q0VGL1 99 aa17.46■□□□□ 0.39
SRRT-209ENST00000474896 UBXN11Q5T124 520 aa17.46■□□□□ 0.39
SRRT-209ENST00000474896 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
SRRT-209ENST00000474896 PSPC1Q8WXF1 523 aaKnown RBP17.46■□□□□ 0.39
SRRT-209ENST00000474896 TMEM175Q9BSA9 504 aa17.46■□□□□ 0.39
SRRT-209ENST00000474896 DHX33Q9H6R0 707 aaKnown RBP17.46■□□□□ 0.39
SRRT-209ENST00000474896 KCNMB3Q9NPA1 279 aa17.46■□□□□ 0.39
SRRT-209ENST00000474896 MRPL17Q9NRX2 175 aaKnown RBP17.46■□□□□ 0.39
SRRT-209ENST00000474896 BMP2KQ9NSY1 1161 aaPredicted RBP17.46■□□□□ 0.39
SRRT-209ENST00000474896 WRAP73Q9P2S5 460 aaPredicted RBP17.46■□□□□ 0.39
SRRT-209ENST00000474896 VAV3Q9UKW4 847 aa17.46■□□□□ 0.39
SRRT-209ENST00000474896 PTPRZ1P23471 2315 aaPredicted RBP17.46■□□□□ 0.38
SRRT-209ENST00000474896 CCDC194A0A1B0GVG4 234 aa17.45■□□□□ 0.38
SRRT-209ENST00000474896 PROB1E7EW31 1015 aa17.45■□□□□ 0.38
SRRT-209ENST00000474896 OTOP3Q7RTS5 596 aa17.45■□□□□ 0.38
SRRT-209ENST00000474896 FAM177A1Q8N128 213 aaPredicted RBP17.45■□□□□ 0.38
SRRT-209ENST00000474896 CNTNAP2Q9UHC6 1331 aa17.45■□□□□ 0.38
SRRT-209ENST00000474896 C2CD2LO14523 706 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 ZBTB39O15060 712 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 ASAP2O43150 1006 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 MARCH6O60337 910 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 CCNT1O60563 726 aaKnown RBP17.44■□□□□ 0.38
SRRT-209ENST00000474896 RFC5P40937 340 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 CLCN5P51795 746 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 EPHA7Q15375 998 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 PPP4R3AQ6IN85 833 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 CCDC149Q6ZUS6 474 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 OTUD6AQ7L8S5 288 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 TAS1R1Q7RTX1 841 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 NEK8Q86SG6 692 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 RNF149Q8NC42 400 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 FLCNQ8NFG4 579 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 HAS1Q92839 578 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 RGL1Q9NZL6 768 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 PPME1Q9Y570 386 aa17.44■□□□□ 0.38
SRRT-209ENST00000474896 SOD2P04179 222 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 ITGA4P13612 1032 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 NCLP19338 710 aaKnown RBP17.43■□□□□ 0.38
SRRT-209ENST00000474896 YWHABP31946 246 aaKnown RBP17.43■□□□□ 0.38
SRRT-209ENST00000474896 AK2P54819 239 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 TDGQ13569 410 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 XKR9Q5GH70 373 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 ASCL5Q7RTU5 278 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 FERMT3Q86UX7 667 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 C4orf19Q8IY42 314 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 SMG8Q8ND04 991 aaKnown RBP17.43■□□□□ 0.38
SRRT-209ENST00000474896 TCP11Q8WWU5 503 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 SNX27Q96L92 541 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 LXNQ9BS40 222 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 PHF20Q9BVI0 1012 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 BACH2Q9BYV9 841 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 KCNK12Q9HB15 430 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 UBN1Q9NPG3 1134 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 PDRG1Q9NUG6 133 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 PLXNA3P51805 1871 aa17.43■□□□□ 0.38
SRRT-209ENST00000474896 PI15O43692 258 aa17.42■□□□□ 0.38
SRRT-209ENST00000474896 URODP06132 367 aa17.42■□□□□ 0.38
SRRT-209ENST00000474896 MYBP10242 640 aa17.42■□□□□ 0.38
SRRT-209ENST00000474896 GCFC2P16383 781 aaKnown RBP17.42■□□□□ 0.38
SRRT-209ENST00000474896 NBL1P41271 181 aa17.42■□□□□ 0.38
SRRT-209ENST00000474896 OR1G1P47890 313 aa17.42■□□□□ 0.38
SRRT-209ENST00000474896 CTTNQ14247 550 aaKnown RBP17.42■□□□□ 0.38
SRRT-209ENST00000474896 EMC2Q15006 297 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms