RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 FERMT3Q86UX7 667 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 SUGP1Q8IWZ8 645 aaKnown RBP27.68■■■□□ 2.02
PKD1-211ENST00000474088 FBXL6Q8N531 539 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 URGCPQ8TCY9 931 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 POMKQ9H5K3 350 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 MUC6Q6W4X9 2439 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 B4GALT3O60512 393 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 SLITRK3O94933 977 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 CYP4A11Q02928 519 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 UBXN11Q5T124 520 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 RNF149Q8NC42 400 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 TNFRSF25Q93038 417 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 ASIC4Q96FT7 647 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 RSAD1Q9HA92 442 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 KANSL3Q9P2N6 904 aa27.67■■■□□ 2.02
PKD1-211ENST00000474088 DDHD2O94830 711 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 MTHFRP42898 656 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 MRE11P49959 708 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 AFF1P51825 1210 aaKnown RBP27.66■■■□□ 2.02
PKD1-211ENST00000474088 IER5LQ5T953 404 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 TPH2Q8IWU9 490 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 C12orf76Q8N812 135 aaPredicted RBP27.66■■■□□ 2.02
PKD1-211ENST00000474088 SLC22A17Q8WUG5 538 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 RIPOR3Q96MK2 946 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 MTRQ99707 1265 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 VN1R3Q9BXE9 311 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 BRMS1Q9HCU9 246 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 TSHZ2Q9NRE2 1034 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 DZANK1Q9NVP4 752 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 CNTNAP2Q9UHC6 1331 aa27.66■■■□□ 2.02
PKD1-211ENST00000474088 ALDH2P05091 517 aa27.65■■■□□ 2.02
PKD1-211ENST00000474088 EPCAMP16422 314 aa27.65■■■□□ 2.02
PKD1-211ENST00000474088 RARS2Q5T160 578 aaKnown RBP27.65■■■□□ 2.02
PKD1-211ENST00000474088 ZBTB33Q86T24 672 aa27.65■■■□□ 2.02
PKD1-211ENST00000474088 NECAB1Q8N987 351 aa27.65■■■□□ 2.02
PKD1-211ENST00000474088 FAM193BQ96PV7 902 aaPredicted RBP27.65■■■□□ 2.02
PKD1-211ENST00000474088 PCDHA12Q9UN75 941 aa27.65■■■□□ 2.02
PKD1-211ENST00000474088 WEE2P0C1S8 567 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 NCLP19338 710 aaKnown RBP27.64■■■□□ 2.02
PKD1-211ENST00000474088 ME3Q16798 604 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 KANK3Q6NY19 840 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 CNNM3Q8NE01 707 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 PRSS33Q8NF86 280 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 EIF2AK1Q9BQI3 630 aaKnown RBP27.64■■■□□ 2.02
PKD1-211ENST00000474088 TMEM175Q9BSA9 504 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 XPNPEP1Q9NQW7 623 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 STK39Q9UEW8 545 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 FAN1Q9Y2M0 1017 aa27.64■■■□□ 2.02
PKD1-211ENST00000474088 ZNF318Q5VUA4 2279 aa27.64■■■□□ 2.01
PKD1-211ENST00000474088 C2CD4DB7Z1M9 353 aa27.63■■■□□ 2.01
PKD1-211ENST00000474088 ERLIN2O94905 339 aa27.63■■■□□ 2.01
PKD1-211ENST00000474088 MXD4Q14582 209 aaPredicted RBP27.63■■■□□ 2.01
PKD1-211ENST00000474088 PCBP1Q15365 356 aaKnown RBP eCLIP27.63■■■□□ 2.01
PKD1-211ENST00000474088 PTPN14Q15678 1187 aa27.63■■■□□ 2.01
PKD1-211ENST00000474088 ATAT1Q5SQI0 421 aa27.63■■■□□ 2.01
PKD1-211ENST00000474088 PPFIBP1Q86W92 1011 aa27.63■■■□□ 2.01
PKD1-211ENST00000474088 SMG8Q8ND04 991 aaKnown RBP27.63■■■□□ 2.01
PKD1-211ENST00000474088 PRRX2Q99811 253 aa27.63■■■□□ 2.01
PKD1-211ENST00000474088 HSD17B14Q9BPX1 270 aa27.63■■■□□ 2.01
PKD1-211ENST00000474088 LYPLA2O95372 231 aa27.62■■■□□ 2.01
PKD1-211ENST00000474088 POMCP01189 267 aa27.62■■■□□ 2.01
PKD1-211ENST00000474088 AXLP30530 894 aa27.62■■■□□ 2.01
PKD1-211ENST00000474088 PTENP60484 403 aa27.62■■■□□ 2.01
PKD1-211ENST00000474088 KIAA1841Q6NSI8 718 aa27.62■■■□□ 2.01
PKD1-211ENST00000474088 KREMEN2Q8NCW0 462 aa27.62■■■□□ 2.01
PKD1-211ENST00000474088 GTF3C6Q969F1 213 aa27.62■■■□□ 2.01
PKD1-211ENST00000474088 UBN1Q9NPG3 1134 aa27.62■■■□□ 2.01
PKD1-211ENST00000474088 NRP1O14786 923 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 LARGE1O95461 756 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 NEFLP07196 543 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 ITGA4P13612 1032 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 POU5F1BQ06416 359 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 CALCRLQ16602 461 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 IFNLR1Q8IU57 520 aaPredicted RBP27.61■■■□□ 2.01
PKD1-211ENST00000474088 KLHL5Q96PQ7 755 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 TTC12Q9H892 705 aaPredicted RBP27.61■■■□□ 2.01
PKD1-211ENST00000474088 ANKEF1Q9NU02 776 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 SORCS3Q9UPU3 1222 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 IPPQ9Y573 584 aa27.61■■■□□ 2.01
PKD1-211ENST00000474088 BTBD18B2RXH4 712 aa27.6■■■□□ 2.01
PKD1-211ENST00000474088 TSPAN1O60635 241 aa27.6■■■□□ 2.01
PKD1-211ENST00000474088 TFDP1Q14186 410 aa27.6■■■□□ 2.01
PKD1-211ENST00000474088 CABP7Q86V35 215 aa27.6■■■□□ 2.01
PKD1-211ENST00000474088 NSUN7Q8NE18 718 aaKnown RBP27.6■■■□□ 2.01
PKD1-211ENST00000474088 EMILIN2Q9BXX0 1053 aa27.6■■■□□ 2.01
PKD1-211ENST00000474088 EIF2AQ9BY44 585 aaKnown RBP27.6■■■□□ 2.01
PKD1-211ENST00000474088 DBR1Q9UK59 544 aaKnown RBP27.6■■■□□ 2.01
PKD1-211ENST00000474088 LILRB3O75022 631 aa27.59■■■□□ 2.01
PKD1-211ENST00000474088 DGAT1O75907 488 aa27.59■■■□□ 2.01
PKD1-211ENST00000474088 SSBP05455 408 aaKnown RBP eCLIP27.59■■■□□ 2.01
PKD1-211ENST00000474088 KLRC2P26717 231 aa27.59■■■□□ 2.01
PKD1-211ENST00000474088 PTPN5P54829 565 aa27.59■■■□□ 2.01
PKD1-211ENST00000474088 NCBP1Q09161 790 aaKnown RBP27.59■■■□□ 2.01
PKD1-211ENST00000474088 NOTUMQ6P988 496 aa27.59■■■□□ 2.01
PKD1-211ENST00000474088 CCDC51Q96ER9 411 aa27.59■■■□□ 2.01
PKD1-211ENST00000474088 CPB2Q96IY4 423 aa27.59■■■□□ 2.01
PKD1-211ENST00000474088 RNF39Q9H2S5 420 aa27.59■■■□□ 2.01
PKD1-211ENST00000474088 ARID2Q68CP9 1835 aa27.58■■■□□ 2.01
PKD1-211ENST00000474088 INO80B-WBP1J3KQ70 363 aa27.58■■■□□ 2.01
PKD1-211ENST00000474088 INPPL1O15357 1258 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms