RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PTGISQ16647 500 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 TCP11X2Q5H9J9 407 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 TCERG1LQ5VWI1 586 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 SARM1Q6SZW1 724 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 SRGAP1Q7Z6B7 1085 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 KSR1Q8IVT5 923 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 DNAJB3Q8WWF6 145 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 PCMTD1Q96MG8 357 aaPredicted RBP11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 KCTD10Q9H3F6 313 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 AGPAT3Q9NRZ7 376 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 IFNKQ9P0W0 207 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 ANKFY1Q9P2R3 1169 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 ARMCX3Q9UH62 379 aaPredicted RBP11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 SCN10AQ9Y5Y9 1956 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 MROH7Q68CQ1 1323 aa11.24□□□□□ -0.61
PRPF38A-202ENST00000474048 SIP14410 1827 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 A0A087WZ62 844 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 A0A1W2PQ45 241 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 A0A1W2PQY0 241 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 MBLAC1A4D2B0 266 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 CLDN3O15551 220 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 TREHO43280 583 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 NRDCO43847 1150 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 PPP1R37O75864 691 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 HARSP12081 509 aaKnown RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 GARTP22102 1010 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 GPC3P51654 580 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 PMS1P54277 932 aaKnown RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 DRP2Q13474 957 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 MYBPC2Q14324 1141 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 PCBP1Q15365 356 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 NFIL3Q16649 462 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 KIZQ2M2Z5 673 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 ZNF568Q3ZCX4 644 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 DCAF17Q5H9S7 520 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 CDKAL1Q5VV42 579 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 CATSPER4Q7RTX7 472 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 FILIP1Q7Z7B0 1213 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 SESTD1Q86VW0 696 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 FAM186BQ8IYM0 893 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 XXYLT1Q8NBI6 393 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 TRIM44Q96DX7 344 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 ZNF668Q96K58 619 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 PRIMPOLQ96LW4 560 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 FIZ1Q96SL8 496 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 DUSP9Q99956 384 aaKnown RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 TUBGCP2Q9BSJ2 902 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 MKNK1Q9BUB5 465 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 NOC4LQ9BVI4 516 aaKnown RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 NFKBIZQ9BYH8 718 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 KIAA1586Q9HCI6 787 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 PAK6Q9NQU5 681 aaPredicted RBP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 PHF24Q9UPV7 400 aa11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRPF38A-202ENST00000474048 STX10O60499 249 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 CLSTN1O94985 981 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 GJB1P08034 283 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ATP1A3P13637 1013 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 CAPN2P17655 700 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ZNF75DP51815 510 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 PTENP60484 403 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 KCNA1Q09470 495 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 TMEM62Q0P6H9 643 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 CETN1Q12798 172 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 MTFR1Q15390 333 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 MAN2A1Q16706 1144 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ZCWPW2Q504Y3 356 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 MARCH8Q5T0T0 291 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ATF7IP2Q5U623 682 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 LHX8Q68G74 356 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ZPBP2Q6X784 338 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ADGRA3Q8IWK6 1321 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 KIAA0319LQ8IZA0 1049 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 PPP1R13LQ8WUF5 828 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ZBTB10Q96DT7 871 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 EEF2KMTQ96G04 330 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 MSTO1Q9BUK6 570 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 VPS16Q9H269 839 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 PCIF1Q9H4Z3 704 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 TAB2Q9NYJ8 693 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 HSPBP1Q9NZL4 362 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ZMYM2Q9UBW7 1377 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 LIMA1Q9UHB6 759 aaKnown RBP11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 TRPV2Q9Y5S1 764 aa11.22□□□□□ -0.61
PRPF38A-202ENST00000474048 ACKR2O00590 384 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 TOM1L1O75674 476 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 ZNF18P17022 549 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 THPOP40225 353 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 COPB1P53618 953 aaKnown RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 MRPS6P82932 125 aaKnown RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 UBXN1Q04323 297 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 PTK7Q13308 1070 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 NOLC1Q14978 699 aaKnown RBP eCLIP11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 KRT31Q15323 416 aa11.21□□□□□ -0.61
PRPF38A-202ENST00000474048 KYAT1Q16773 422 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms