RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 MEX3CQ5U5Q3 659 aaKnown RBP11.83□□□□□ -0.52
C9orf3-214ENST00000473778 TTC27Q6P3X3 843 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 ZDHHC24Q6UX98 284 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 B4GALNT4Q76KP1 1039 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 CCDC26Q8TAB7 109 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 MDM1Q8TC05 714 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 FMO2Q99518 471 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 RANBP17Q9H2T7 1088 aaKnown RBP11.83□□□□□ -0.52
C9orf3-214ENST00000473778 UBE2TQ9NPD8 197 aaPredicted RBP11.83□□□□□ -0.52
C9orf3-214ENST00000473778 SUFUQ9UMX1 484 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 UTP11Q9Y3A2 253 aaKnown RBP11.83□□□□□ -0.52
C9orf3-214ENST00000473778 CAPN7Q9Y6W3 813 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 ATXN2Q99700 1313 aaKnown RBP11.83□□□□□ -0.52
C9orf3-214ENST00000473778 CAND2O75155 1236 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 TNFAIP3P21580 790 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 CHRNA5P30532 468 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 GCLMP48507 274 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 IFT88Q13099 833 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 FBXO25Q8TCJ0 367 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 NACC1Q96RE7 527 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 CEP89Q96ST8 783 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 AGPAT1Q99943 283 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.83□□□□□ -0.52
C9orf3-214ENST00000473778 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 ODF2LQ9ULJ1 636 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 TMX2Q9Y320 296 aa11.83□□□□□ -0.52
C9orf3-214ENST00000473778 K7ENM7 598 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 ENTPD3O75355 529 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 FTLP02792 175 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 HNRNPH1P31943 449 aaKnown RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 PPP2R2AP63151 447 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 KRT71Q3SY84 523 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 SLC9A9Q8IVB4 645 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 PRELID2Q8N945 189 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 PRPF38AQ8NAV1 312 aaKnown RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 RAPGEF5Q92565 580 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 RNF25Q96BH1 459 aaPredicted RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 BTBD6Q96KE9 485 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 ERP44Q9BS26 406 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 WDR11Q9BZH6 1224 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 GRHL1Q9NZI5 618 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 SNX24Q9Y343 169 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 PCDHA3Q9Y5H8 950 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 LOXHD1Q8IVV2 1947 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 ANKRD63C9JTQ0 380 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 KIAA0391O15091 583 aaKnown RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 DHX15O43143 795 aaKnown RBP11.82□□□□□ -0.52
C9orf3-214ENST00000473778 CHRNB2P17787 502 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 MAP2K2P36507 400 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 PTGIRP43119 386 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 PLTPP55058 493 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 SATB1Q01826 763 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 BIRC3Q13489 604 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 EPC2Q52LR7 807 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 JAMLQ86YT9 394 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 SYCP3Q8IZU3 236 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 KCTD17Q8N5Z5 321 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 OTUD6BQ8N6M0 293 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 TLCD1Q96CP7 247 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 FAM114A2Q9NRY5 505 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 PNMA2Q9UL42 364 aa11.82□□□□□ -0.52
C9orf3-214ENST00000473778 UBE4BO95155 1302 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 RPTORQ8N122 1335 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 GMNCA6NCL1 334 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 TMEM110-MUSTN1A8MSY1 372 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 FSBPO95073 299 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 SGPL1O95470 568 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 LLGL1Q15334 1064 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 AGBL2Q5U5Z8 902 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 RUFY4Q6ZNE9 571 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 NOP9Q86U38 636 aaKnown RBP11.81□□□□□ -0.52
C9orf3-214ENST00000473778 RPUSD2Q8IZ73 545 aaKnown RBP11.81□□□□□ -0.52
C9orf3-214ENST00000473778 AGBL1Q96MI9 1066 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 OSBPL7Q9BZF2 842 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 ADAM7Q9H2U9 754 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 GPRC5CQ9NQ84 441 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 KCNH7Q9NS40 1196 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 ZBTB21Q9ULJ3 1066 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 ARHGEF35A5YM69 484 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 PHF20L1A8MW92 1017 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 ADRB2P07550 413 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 COMTP21964 271 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 RPL21P46778 160 aaKnown RBP11.81□□□□□ -0.52
C9orf3-214ENST00000473778 PEX5P50542 639 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 MTMR3Q13615 1198 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 ODF2Q5BJF6 829 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 MIGA2Q7L4E1 593 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 YTHDF3Q7Z739 585 aaKnown RBP11.81□□□□□ -0.52
C9orf3-214ENST00000473778 SLC47A2Q86VL8 602 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 LDHDQ86WU2 507 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 EPS8L1Q8TE68 723 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 FAM84AQ96KN4 292 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 KREMEN1Q96MU8 473 aa11.81□□□□□ -0.52
C9orf3-214ENST00000473778 CTTNBP2NLQ9P2B4 639 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms