RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 RAB27AP51159 221 aa22.9■■□□□ 1.26
TOP3A-204ENST00000472959 NDUFA8P51970 172 aa22.9■■□□□ 1.26
TOP3A-204ENST00000472959 RABGGTBP53611 331 aa22.9■■□□□ 1.26
TOP3A-204ENST00000472959 PRPF4BQ13523 1007 aaKnown RBP22.9■■□□□ 1.26
TOP3A-204ENST00000472959 CNNM4Q6P4Q7 775 aa22.9■■□□□ 1.26
TOP3A-204ENST00000472959 TMCO2Q7Z6W1 182 aaPredicted RBP22.9■■□□□ 1.26
TOP3A-204ENST00000472959 KCNN1Q92952 543 aa22.9■■□□□ 1.26
TOP3A-204ENST00000472959 TMEM161AQ9NX61 479 aa22.9■■□□□ 1.26
TOP3A-204ENST00000472959 SEL1LQ9UBV2 794 aa22.9■■□□□ 1.26
TOP3A-204ENST00000472959 LRFN2Q9ULH4 789 aa22.9■■□□□ 1.26
TOP3A-204ENST00000472959 CNTNAP2Q9UHC6 1331 aa22.89■■□□□ 1.26
TOP3A-204ENST00000472959 A0A1B0GUA9 196 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 ACTN4O43707 911 aaKnown RBP22.89■■□□□ 1.25
TOP3A-204ENST00000472959 TRAK2O60296 914 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 EOMESO95936 686 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 ARF4P18085 180 aaPredicted RBP22.89■■□□□ 1.25
TOP3A-204ENST00000472959 ABCD1P33897 745 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 HTRA4P83105 476 aaPredicted RBP22.89■■□□□ 1.25
TOP3A-204ENST00000472959 GPR153Q6NV75 609 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 FAM117BQ6P1L5 589 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 ECHDC2Q86YB7 292 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 TMEM87AQ8NBN3 555 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 TMEM161BQ8NDZ6 487 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 C7orf25Q9BPX7 421 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 TRIM9Q9C026 710 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 SERTAD1Q9UHV2 236 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 MICAL3Q7RTP6 2002 aa22.89■■□□□ 1.25
TOP3A-204ENST00000472959 B4GALT5O43286 388 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 ZNF623O75123 536 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 MAPTP10636 758 aaKnown RBP22.88■■□□□ 1.25
TOP3A-204ENST00000472959 DNAJB2P25686 324 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 PBX2P40425 430 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 NCKAP1LP55160 1127 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 LONRF3Q496Y0 759 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 TPRNQ4KMQ1 711 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 FAM178BQ8IXR5 827 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 CCDC65Q8IXS2 484 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 STAMQ92783 540 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 YME1L1Q96TA2 773 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 GOLPH3LQ9H4A5 285 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 FAM105AQ9NUU6 356 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 TCHHQ07283 1943 aa22.88■■□□□ 1.25
TOP3A-204ENST00000472959 FRMD3A2A2Y4 597 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 DGKIO75912 1065 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 IDEP14735 1019 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 LIG1P18858 919 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 FXR1P51114 621 aaKnown RBP eCLIP22.87■■□□□ 1.25
TOP3A-204ENST00000472959 STRN3Q13033 797 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 CLEC17AQ6ZS10 378 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 HAUS6Q7Z4H7 955 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 CNNM3Q8NE01 707 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 TIFAQ96CG3 184 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 PAGE5Q96GU1 130 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 CPB2Q96IY4 423 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 PANK4Q9NVE7 773 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 YBX2Q9Y2T7 364 aaKnown RBP22.87■■□□□ 1.25
TOP3A-204ENST00000472959 PCDHB2Q9Y5E7 798 aa22.87■■□□□ 1.25
TOP3A-204ENST00000472959 TMEM265A0A087WTH1 108 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 N4BP3O15049 544 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 HOXA2O43364 376 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 ZNF202O95125 648 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 MYL1P05976 194 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 TMEM132AQ24JP5 1023 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 UBXN11Q5T124 520 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 SLC27A1Q6PCB7 646 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 ZNF598Q86UK7 904 aaKnown RBP22.86■■□□□ 1.25
TOP3A-204ENST00000472959 SFR1Q86XK3 245 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 CCDC34Q96HJ3 373 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 LRCH3Q96II8 777 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 MRPL4Q9BYD3 311 aaKnown RBP22.86■■□□□ 1.25
TOP3A-204ENST00000472959 ST6GALNAC4Q9H4F1 302 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 OLFML3Q9NRN5 406 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 TTC3P53804 2025 aa22.86■■□□□ 1.25
TOP3A-204ENST00000472959 LAMA3Q16787 3333 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 K7ENM7 598 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 MYOGP15173 224 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 IBSPP21815 317 aaPredicted RBP22.85■■□□□ 1.25
TOP3A-204ENST00000472959 AFMP43652 599 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 ASIC1P78348 528 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 HERC4Q5GLZ8 1057 aaPredicted RBP22.85■■□□□ 1.25
TOP3A-204ENST00000472959 NT5DC1Q5TFE4 455 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 TAS1R3Q7RTX0 852 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 APBB1IPQ7Z5R6 666 aaPredicted RBP22.85■■□□□ 1.25
TOP3A-204ENST00000472959 MRPL10Q7Z7H8 261 aaKnown RBP22.85■■□□□ 1.25
TOP3A-204ENST00000472959 SP7Q8TDD2 431 aaPredicted RBP22.85■■□□□ 1.25
TOP3A-204ENST00000472959 ZNF689Q96CS4 500 aaPredicted RBP22.85■■□□□ 1.25
TOP3A-204ENST00000472959 PGBD4Q96DM1 585 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 FIZ1Q96SL8 496 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 SLC28A3Q9HAS3 691 aa22.85■■□□□ 1.25
TOP3A-204ENST00000472959 CA3P07451 260 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 GTF2BQ00403 316 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 FAM160A1Q05DH4 1040 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 ATF7IP2Q5U623 682 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 KANK3Q6NY19 840 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 KRBA2Q6ZNG9 492 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 ZNF720Q7Z2F6 126 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 RSPH1Q8WYR4 309 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 ADPGKQ9BRR6 497 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 TRIM6Q9C030 488 aaPredicted RBP22.84■■□□□ 1.25
TOP3A-204ENST00000472959 NKX2-4Q9H2Z4 354 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms