RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 MRE11P49959 708 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 SIGLEC14Q08ET2 396 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 XKR9Q5GH70 373 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 CES5AQ6NT32 575 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 SRGAP1Q7Z6B7 1085 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 ZBTB33Q86T24 672 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 DDX53Q86TM3 631 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 FERMT3Q86UX7 667 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 SUGP1Q8IWZ8 645 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 RNF149Q8NC42 400 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 URGCPQ8TCY9 931 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 TNFRSF25Q93038 417 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 PGBD4Q96DM1 585 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 ASIC4Q96FT7 647 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 PHOX2BQ99453 314 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 MTRQ99707 1265 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 ADAM7Q9H2U9 754 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 RSAD1Q9HA92 442 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 XPNPEP1Q9NQW7 623 aa10.98□□□□□ -0.65
NUDCD3-205ENST00000472246 MYO15AQ9UKN7 3530 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 PDGFBP01127 241 aaPredicted RBP10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 SSBP05455 408 aaKnown RBP eCLIP10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 VCPP55072 806 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 ITIH3Q06033 890 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 BMS1Q14692 1282 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 PTPN14Q15678 1187 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 ME3Q16798 604 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 OTUD6AQ7L8S5 288 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 MRPL10Q7Z7H8 261 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 TPH2Q8IWU9 490 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 SLFN12Q8IYM2 578 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 FBXL6Q8N531 539 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 SMG8Q8ND04 991 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 TCP11Q8WWU5 503 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 RSPH1Q8WYR4 309 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 NAP1L4Q99733 375 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 EIF2AK1Q9BQI3 630 aaKnown RBP10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 SMOC2Q9H3U7 446 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 ZSWIM4Q9H7M6 989 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 NR2E1Q9Y466 385 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 PPME1Q9Y570 386 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 IRAK3Q9Y616 596 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 DENND4AQ7Z401 1863 aa10.97□□□□□ -0.65
NUDCD3-205ENST00000472246 USP34Q70CQ2 3546 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 GAS2O43903 313 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 TSPAN1O60635 241 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 JAK2O60674 1132 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 ERLIN2O94905 339 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 SLITRK3O94933 977 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 ANAPC15P60006 121 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 ANKRD1Q15327 319 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 KIAA1841Q6NSI8 718 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 TMC5Q6UXY8 1006 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 EXOC8Q8IYI6 725 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 KREMEN2Q8NCW0 462 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 NSUN7Q8NE18 718 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 ASAP3Q8TDY4 903 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 SLC22A17Q8WUG5 538 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 WASF1Q92558 559 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 GTF3C6Q969F1 213 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 CPB2Q96IY4 423 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 RIPOR3Q96MK2 946 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 NECTIN4Q96NY8 510 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 EIF2AQ9BY44 585 aaKnown RBP10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 RNF39Q9H2S5 420 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 BRMS1Q9HCU9 246 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 DZANK1Q9NVP4 752 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 MARCH5Q9NX47 278 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 PRG3Q9Y2Y8 225 aaPredicted RBP10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 HES2Q9Y543 173 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 IPPQ9Y573 584 aa10.96□□□□□ -0.65
NUDCD3-205ENST00000472246 CNTNAP2Q9UHC6 1331 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 A0A087WWV3 80 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 CARNS1A5YM72 827 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 BTBD18B2RXH4 712 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 NRP1O14786 923 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 ASAP2O43150 1006 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 BRD1O95696 1058 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 NEFLP07196 543 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 ASGR2P07307 311 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 ITGA4P13612 1032 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 NCLP19338 710 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 MLH1P40692 756 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 MTHFRP42898 656 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 PTENP60484 403 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 ST3GAL1Q11201 340 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 TCF15Q12870 199 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 CAPSQ13938 189 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 GIT2Q14161 759 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 CALCRLQ16602 461 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 CABP7Q86V35 215 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 DIS3L2Q8IYB7 885 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 TDRD5Q8NAT2 981 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 KLHL5Q96PQ7 755 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 FAM193BQ96PV7 902 aaPredicted RBP10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 APOL6Q9BWW8 343 aa10.95□□□□□ -0.66
NUDCD3-205ENST00000472246 DBR1Q9UK59 544 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms