RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 GAS2O43903 313 aaKnown RBP11.63□□□□□ -0.55
CDHR3-209ENST00000472116 LILRB3O75022 631 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 SOD2P04179 222 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 SPATA31D3P0C874 917 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 KIF5BP33176 963 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 CXCL12P48061 93 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 GLUD2P49448 558 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 SF3A2Q15428 464 aaKnown RBP11.63□□□□□ -0.55
CDHR3-209ENST00000472116 TWF2Q6IBS0 349 aaKnown RBP11.63□□□□□ -0.55
CDHR3-209ENST00000472116 PDXDC2PQ6P474 469 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 MAMSTRQ6ZN01 415 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 SPATA31D4Q6ZUB0 917 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 FAM160A2Q8N612 972 aaPredicted RBP11.63□□□□□ -0.55
CDHR3-209ENST00000472116 MS4A3Q96HJ5 214 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 KXD1Q9BQD3 176 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 TMEM175Q9BSA9 504 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 HERC2P3Q9BVR0 1158 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 CNNM2Q9H8M5 875 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 ZNF302Q9NR11 478 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 ZSWIM5Q9P217 1185 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 DNAJB4Q9UDY4 337 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 SEC63Q9UGP8 760 aaKnown RBP11.63□□□□□ -0.55
CDHR3-209ENST00000472116 NAV2Q8IVL1 2488 aa11.63□□□□□ -0.55
CDHR3-209ENST00000472116 TICRRQ7Z2Z1 1910 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 CHURC1-FNTBB4DL54 471 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 MAGEB2O15479 319 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 C22orf31O95567 290 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 C1RP00736 705 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 ZNF806P0C7X5 589 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 TDGF1P13385 188 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 MX1P20591 662 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 PHKA2P46019 1235 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 FNTBP49356 437 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 RAB27AP51159 221 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 LONRF3Q496Y0 759 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 RNF43Q68DV7 783 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 LONP2Q86WA8 852 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 PALB2Q86YC2 1186 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 LPPQ93052 612 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 PGBD4Q96DM1 585 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 ARRDC1-AS1Q9H2J1 176 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 ADAMTS10Q9H324 1103 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 CHST12Q9NRB3 414 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 HEBP1Q9NRV9 189 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 KCNH7Q9NS40 1196 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 KANSL3Q9P2N6 904 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
CDHR3-209ENST00000472116 TCEAL9Q9UHQ7 104 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 MAST4O15021 2626 aa11.62□□□□□ -0.55
CDHR3-209ENST00000472116 DSPP15924 2871 aaKnown RBP11.61□□□□□ -0.55
CDHR3-209ENST00000472116 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 MEIS2O14770 477 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 HRO43593 1189 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 SPINK2P20155 84 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 CLCN3P51790 818 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 CREMQ03060 361 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 GRM4Q14833 912 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 LIN9Q5TKA1 542 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 DAB2IPQ5VWQ8 1189 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 MIS18BP1Q6P0N0 1132 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 TRMT1LQ7Z2T5 733 aaKnown RBP11.61□□□□□ -0.55
CDHR3-209ENST00000472116 GRASPQ7Z6J2 395 aaPredicted RBP11.61□□□□□ -0.55
CDHR3-209ENST00000472116 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 DNASE1L2Q92874 299 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 FGF13Q92913 245 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 RRP36Q96EU6 259 aaKnown RBP11.61□□□□□ -0.55
CDHR3-209ENST00000472116 FAM227BQ96M60 508 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDHR3-209ENST00000472116 RXFP3Q9NSD7 469 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 POLIQ9UNA4 740 aa11.61□□□□□ -0.55
CDHR3-209ENST00000472116 ERICH2A1L162 156 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 DDX39AO00148 427 aaKnown RBP11.6□□□□□ -0.55
CDHR3-209ENST00000472116 AXIN1O15169 862 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 ZMYND10O75800 440 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 PAPLNO95428 1278 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 DARSP14868 501 aaKnown RBP11.6□□□□□ -0.55
CDHR3-209ENST00000472116 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
CDHR3-209ENST00000472116 SFPQP23246 707 aaKnown RBP eCLIP11.6□□□□□ -0.55
CDHR3-209ENST00000472116 SRSF5Q13243 272 aaKnown RBP11.6□□□□□ -0.55
CDHR3-209ENST00000472116 SOWAHCQ53LP3 525 aaPredicted RBP11.6□□□□□ -0.55
CDHR3-209ENST00000472116 HEATR6Q6AI08 1181 aaKnown RBP11.6□□□□□ -0.55
CDHR3-209ENST00000472116 EFCAB12Q6NXP0 572 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 SLC39A7Q92504 469 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 GATA6Q92908 595 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 LOXL4Q96JB6 756 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 SCNM1Q9BWG6 230 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 TMEM121BQ9BXQ6 578 aaPredicted RBP11.6□□□□□ -0.55
CDHR3-209ENST00000472116 DCTPP1Q9H773 170 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 LMAN1LQ9HAT1 526 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 RXFP1Q9HBX9 757 aa11.6□□□□□ -0.55
CDHR3-209ENST00000472116 NRP1O14786 923 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 TGM5O43548 720 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 CYTH3O43739 400 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 XYLBO75191 536 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 NR1I2O75469 434 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 OFD1O75665 1012 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 ATG7O95352 703 aa11.59□□□□□ -0.55
CDHR3-209ENST00000472116 FGFR4P22455 802 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms