RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ATP2B1P20020 1258 aa25.1■■□□□ 1.61
C9orf3-213ENST00000471978 UBXN11Q5T124 520 aa25.1■■□□□ 1.61
C9orf3-213ENST00000471978 CCDC83Q8IWF9 413 aa25.1■■□□□ 1.61
C9orf3-213ENST00000471978 IGSF21Q96ID5 467 aa25.1■■□□□ 1.61
C9orf3-213ENST00000471978 APOL5Q9BWW9 433 aa25.1■■□□□ 1.61
C9orf3-213ENST00000471978 DGAT1O75907 488 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 HOXB8P17481 243 aaPredicted RBP25.09■■□□□ 1.61
C9orf3-213ENST00000471978 MCM7P33993 719 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 PTENP60484 403 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 TFDP1Q14186 410 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 CBX2Q14781 532 aaPredicted RBP25.09■■□□□ 1.61
C9orf3-213ENST00000471978 PCBP1Q15365 356 aaKnown RBP eCLIP25.09■■□□□ 1.61
C9orf3-213ENST00000471978 SYCE2Q6PIF2 218 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 DDX53Q86TM3 631 aaKnown RBP25.09■■□□□ 1.61
C9orf3-213ENST00000471978 CASP10Q92851 521 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 RPGRIP1Q96KN7 1286 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 ZBP1Q9H171 429 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 TMEM60Q9H2L4 133 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 RSAD1Q9HA92 442 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 DNAJB4Q9UDY4 337 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 CNTNAP2Q9UHC6 1331 aa25.09■■□□□ 1.61
C9orf3-213ENST00000471978 POTEMA6NI47 508 aa25.08■■□□□ 1.61
C9orf3-213ENST00000471978 CLASP2O75122 1294 aaKnown RBP25.08■■□□□ 1.61
C9orf3-213ENST00000471978 SLC11A1P49279 550 aa25.08■■□□□ 1.61
C9orf3-213ENST00000471978 RARRES1P49788 294 aa25.08■■□□□ 1.61
C9orf3-213ENST00000471978 ZNF280BQ86YH2 543 aa25.08■■□□□ 1.61
C9orf3-213ENST00000471978 PIGOQ8TEQ8 1089 aa25.08■■□□□ 1.61
C9orf3-213ENST00000471978 BCL7CQ8WUZ0 217 aaPredicted RBP25.08■■□□□ 1.61
C9orf3-213ENST00000471978 C8orf76Q96K31 380 aa25.08■■□□□ 1.61
C9orf3-213ENST00000471978 HCFC2Q9Y5Z7 792 aa25.08■■□□□ 1.61
C9orf3-213ENST00000471978 A0A087WWV3 80 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.07■■□□□ 1.6
C9orf3-213ENST00000471978 INO80B-WBP1J3KQ70 363 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 B4GALT3O60512 393 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 TSPAN1O60635 241 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 NCLP19338 710 aaKnown RBP25.07■■□□□ 1.6
C9orf3-213ENST00000471978 ARL2P36404 184 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 AFF1P51825 1210 aaKnown RBP25.07■■□□□ 1.6
C9orf3-213ENST00000471978 POU5F1BQ06416 359 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 NCBP1Q09161 790 aaKnown RBP25.07■■□□□ 1.6
C9orf3-213ENST00000471978 TMEM87AQ8NBN3 555 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 CNNM3Q8NE01 707 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 ASAP3Q8TDY4 903 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 AUTS2Q8WXX7 1259 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 LLPHQ9BRT6 129 aaKnown RBP25.07■■□□□ 1.6
C9orf3-213ENST00000471978 KANSL3Q9P2N6 904 aa25.07■■□□□ 1.6
C9orf3-213ENST00000471978 DDHD2O94830 711 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 CTSAP10619 480 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 AXLP30530 894 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 CAPSQ13938 189 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 TPRNQ4KMQ1 711 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 NOTUMQ6P988 496 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 IFNLR1Q8IU57 520 aaPredicted RBP25.06■■□□□ 1.6
C9orf3-213ENST00000471978 SMG8Q8ND04 991 aaKnown RBP25.06■■□□□ 1.6
C9orf3-213ENST00000471978 EDAQ92838 391 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 CPB2Q96IY4 423 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 FAM193BQ96PV7 902 aaPredicted RBP25.06■■□□□ 1.6
C9orf3-213ENST00000471978 UBN1Q9NPG3 1134 aa25.06■■□□□ 1.6
C9orf3-213ENST00000471978 POMCP01189 267 aa25.05■■□□□ 1.6
C9orf3-213ENST00000471978 XRCC6P12956 609 aaKnown RBP eCLIP25.05■■□□□ 1.6
C9orf3-213ENST00000471978 ITGA4P13612 1032 aa25.05■■□□□ 1.6
C9orf3-213ENST00000471978 GLRA2P23416 452 aa25.05■■□□□ 1.6
C9orf3-213ENST00000471978 MBTD1Q05BQ5 628 aa25.05■■□□□ 1.6
C9orf3-213ENST00000471978 GIT2Q14161 759 aa25.05■■□□□ 1.6
C9orf3-213ENST00000471978 CCDC51Q96ER9 411 aa25.05■■□□□ 1.6
C9orf3-213ENST00000471978 EIF2AQ9BY44 585 aaKnown RBP25.05■■□□□ 1.6
C9orf3-213ENST00000471978 IPPQ9Y573 584 aa25.05■■□□□ 1.6
C9orf3-213ENST00000471978 IRAK3Q9Y616 596 aa25.05■■□□□ 1.6
C9orf3-213ENST00000471978 USO1O60763 962 aaKnown RBP25.04■■□□□ 1.6
C9orf3-213ENST00000471978 ALDH2P05091 517 aa25.04■■□□□ 1.6
C9orf3-213ENST00000471978 SPATA31C1P0DKV0 1188 aa25.04■■□□□ 1.6
C9orf3-213ENST00000471978 ZSCAN31Q96LW9 406 aaPredicted RBP25.04■■□□□ 1.6
C9orf3-213ENST00000471978 TMEM175Q9BSA9 504 aa25.04■■□□□ 1.6
C9orf3-213ENST00000471978 VN1R3Q9BXE9 311 aa25.04■■□□□ 1.6
C9orf3-213ENST00000471978 CSRNP2Q9H175 543 aa25.04■■□□□ 1.6
C9orf3-213ENST00000471978 POLR3FQ9H1D9 316 aaPredicted RBP25.04■■□□□ 1.6
C9orf3-213ENST00000471978 FOXP1Q9H334 677 aaPredicted RBP25.04■■□□□ 1.6
C9orf3-213ENST00000471978 TUFT1Q9NNX1 390 aa25.04■■□□□ 1.6
C9orf3-213ENST00000471978 FAN1Q9Y2M0 1017 aa25.04■■□□□ 1.6
C9orf3-213ENST00000471978 ZNF174Q15697 407 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 AMHR2Q16671 573 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 CES5AQ6NT32 575 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 HFE2Q6ZVN8 426 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 CATSPER3Q86XQ3 398 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 NFKBIZQ9BYH8 718 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 RNF39Q9H2S5 420 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 ADAM7Q9H2U9 754 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 STK39Q9UEW8 545 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 WDFY4Q6ZS81 3184 aa25.03■■□□□ 1.6
C9orf3-213ENST00000471978 MED24O75448 989 aa25.02■■□□□ 1.6
C9orf3-213ENST00000471978 CENPBP07199 599 aaPredicted RBP25.02■■□□□ 1.6
C9orf3-213ENST00000471978 HMGN5P82970 282 aaKnown RBP25.02■■□□□ 1.6
C9orf3-213ENST00000471978 ITIH3Q06033 890 aa25.02■■□□□ 1.6
C9orf3-213ENST00000471978 ORC2Q13416 577 aaPredicted RBP25.02■■□□□ 1.6
C9orf3-213ENST00000471978 MAEAQ7L5Y9 396 aa25.02■■□□□ 1.6
C9orf3-213ENST00000471978 FAM184AQ8NB25 1140 aa25.02■■□□□ 1.6
C9orf3-213ENST00000471978 FBXO18Q8NFZ0 1043 aa25.02■■□□□ 1.6
C9orf3-213ENST00000471978 CDH22Q9UJ99 828 aa25.02■■□□□ 1.6
C9orf3-213ENST00000471978 HES2Q9Y543 173 aa25.02■■□□□ 1.6
C9orf3-213ENST00000471978 ARL5CA6NH57 179 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms