RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 KMT5AQ9NQR1 393 aa10.89□□□□□ -0.67
SF3A1-207ENST00000471342 AGPAT3Q9NRZ7 376 aa10.89□□□□□ -0.67
SF3A1-207ENST00000471342 EXOC1Q9NV70 894 aa10.89□□□□□ -0.67
SF3A1-207ENST00000471342 ALPK3Q96L96 1907 aa10.89□□□□□ -0.67
SF3A1-207ENST00000471342 A0A0B4J269 797 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 A0A1B0GUA9 196 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 LETM1O95202 739 aaPredicted RBP10.88□□□□□ -0.67
SF3A1-207ENST00000471342 ADRB2P07550 413 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 GNAT1P11488 350 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 ARF4P18085 180 aaPredicted RBP10.88□□□□□ -0.67
SF3A1-207ENST00000471342 EIF4BP23588 611 aaKnown RBP10.88□□□□□ -0.67
SF3A1-207ENST00000471342 CCNE1P24864 410 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 ERCC5P28715 1186 aaPredicted RBP10.88□□□□□ -0.67
SF3A1-207ENST00000471342 CASP4P49662 377 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 FAM47CQ5HY64 1035 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 TSHZ1Q6ZSZ6 1077 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 SRGAP1Q7Z6B7 1085 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 SLC9A9Q8IVB4 645 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 NELFCDQ8IXH7 590 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 TMEM192Q8IY95 271 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 EXOC8Q8IYI6 725 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 MYOCDQ8IZQ8 938 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 RETREG2Q8NC44 543 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 ENOX1Q8TC92 643 aaKnown RBP10.88□□□□□ -0.67
SF3A1-207ENST00000471342 EVPLQ92817 2033 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 P2RX5Q93086 422 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 DHTKD1Q96HY7 919 aaPredicted RBP10.88□□□□□ -0.67
SF3A1-207ENST00000471342 NLRP4Q96MN2 994 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 PDZD7Q9H5P4 517 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 RWDD2AQ9UIY3 292 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 TRPV2Q9Y5S1 764 aa10.88□□□□□ -0.67
SF3A1-207ENST00000471342 LRRIQ4A6NIV6 560 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 K7ENM7 598 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 PDXKO00764 312 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 CAND2O75155 1236 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 TBCAO75347 108 aaKnown RBP10.87□□□□□ -0.67
SF3A1-207ENST00000471342 AKAP3O75969 853 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 GCNT3O95395 438 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 ATF7P17544 494 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-207ENST00000471342 STX17P56962 302 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 FAM189BP81408 668 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 MCL1Q07820 350 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 DMP1Q13316 513 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-207ENST00000471342 STX1AQ16623 288 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 CT47A1Q5JQC4 288 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-207ENST00000471342 NECAB2Q7Z6G3 386 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 LUZP1Q86V48 1076 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 CDR2LQ86X02 465 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-207ENST00000471342 TMEM130Q8N3G9 435 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 CEP120Q8N960 986 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 CXorf38Q8TB03 319 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 NELFBQ8WX92 580 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 SYAP1Q96A49 352 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-207ENST00000471342 HVCN1Q96D96 273 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 EEF2KMTQ96G04 330 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 TMEM106CQ9BVX2 250 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 SAMSN1Q9NSI8 373 aaKnown RBP10.87□□□□□ -0.67
SF3A1-207ENST00000471342 RNF19AQ9NV58 838 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 INTS13Q9NVM9 706 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 ANO10Q9NW15 660 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 RMND1Q9NWS8 449 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 HOOK1Q9UJC3 728 aaKnown RBP10.87□□□□□ -0.67
SF3A1-207ENST00000471342 AKT3Q9Y243 479 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 TNFSF13BQ9Y275 285 aa10.87□□□□□ -0.67
SF3A1-207ENST00000471342 UBE4BO95155 1302 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 PHLPP2Q6ZVD8 1323 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 CNTNAP2Q9UHC6 1331 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 LOXHD1Q8IVV2 1947 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 COL4A6Q14031 1691 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 LRRC10BA6NIK2 292 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 CCDC169A6NNP5 214 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 MEIS3P2A8K0S8 358 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 PQBP1O60828 265 aaKnown RBP10.86□□□□□ -0.67
SF3A1-207ENST00000471342 KRT18P05783 430 aaKnown RBP10.86□□□□□ -0.67
SF3A1-207ENST00000471342 TMOD1P28289 359 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 THPOP40225 353 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 EPHB4P54760 987 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 MARSP56192 900 aaKnown RBP10.86□□□□□ -0.67
SF3A1-207ENST00000471342 PLEKHG4Q58EX7 1191 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 ZPBP2Q6X784 338 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 SMG8Q8ND04 991 aaKnown RBP10.86□□□□□ -0.67
SF3A1-207ENST00000471342 GSTCDQ8NEC7 633 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 SCLYQ96I15 445 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 EIF2AQ9BY44 585 aaKnown RBP10.86□□□□□ -0.67
SF3A1-207ENST00000471342 CDT1Q9H211 546 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 AGPAT5Q9NUQ2 364 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 TYW1Q9NV66 732 aaKnown RBP10.86□□□□□ -0.67
SF3A1-207ENST00000471342 FANCLQ9NW38 375 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 ST3GAL5Q9UNP4 418 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 CTNND2Q9UQB3 1225 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 SQORQ9Y6N5 450 aa10.86□□□□□ -0.67
SF3A1-207ENST00000471342 K7ERI5 159 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 IKBKBO14920 756 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 CLIC2O15247 247 aa10.85□□□□□ -0.67
SF3A1-207ENST00000471342 PRKCBP05771 671 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms