RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 MAP3K2Q9Y2U5 619 aa4.43□□□□□ -1.7
CLIP4-209ENST00000471165 CCDC187A0A096LP49 1063 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 MARCH11A6NNE9 402 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 DIRC3C9JPN6 131 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 SCDO00767 359 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 NACADO15069 1562 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 DAPK3O43293 454 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 MTSS1O43312 755 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 DDAH1O94760 285 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 NHLH2Q02577 135 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 SCAPQ12770 1279 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 RESTQ13127 1097 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 EIF2B5Q13144 721 aaKnown RBP4.42□□□□□ -1.7
CLIP4-209ENST00000471165 CRY1Q16526 586 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 PDCD4Q53EL6 469 aaKnown RBP4.42□□□□□ -1.7
CLIP4-209ENST00000471165 Q6ZNX1 250 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 C16orf59Q7L2K0 433 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 OSBP2Q969R2 916 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 ACSS2Q9NR19 701 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 KCNH7Q9NS40 1196 aa4.42□□□□□ -1.7
CLIP4-209ENST00000471165 MANSC4A6NHS7 340 aaPredicted RBP4.41□□□□□ -1.7
CLIP4-209ENST00000471165 HNRNPLP14866 589 aaKnown RBP eCLIP4.41□□□□□ -1.7
CLIP4-209ENST00000471165 ERCC3P19447 782 aa4.41□□□□□ -1.7
CLIP4-209ENST00000471165 AWAT2Q6E213 333 aa4.41□□□□□ -1.7
CLIP4-209ENST00000471165 PCDH19Q8TAB3 1148 aa4.41□□□□□ -1.7
CLIP4-209ENST00000471165 FOXB1Q99853 325 aa4.41□□□□□ -1.7
CLIP4-209ENST00000471165 IL17RBQ9NRM6 502 aa4.41□□□□□ -1.7
CLIP4-209ENST00000471165 DNAI1Q9UI46 699 aa4.41□□□□□ -1.7
CLIP4-209ENST00000471165 ERCC6Q03468 1493 aa4.41□□□□□ -1.7
CLIP4-209ENST00000471165 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
CLIP4-209ENST00000471165 KLF9Q13886 244 aaPredicted RBP4.4□□□□□ -1.71
CLIP4-209ENST00000471165 HSP90AA2PQ14568 343 aaPredicted RBP4.4□□□□□ -1.71
CLIP4-209ENST00000471165 ETFDHQ16134 617 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 DOK3Q7L591 496 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 SYT12Q8IV01 421 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 NOSTRINQ8IVI9 506 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 SAMD14Q8IZD0 417 aaPredicted RBP4.4□□□□□ -1.71
CLIP4-209ENST00000471165 ERCC4Q92889 916 aaPredicted RBP4.4□□□□□ -1.71
CLIP4-209ENST00000471165 DYDC2Q96IM9 177 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 BCL11AQ9H165 835 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 POLR3BQ9NW08 1133 aaPredicted RBP4.4□□□□□ -1.71
CLIP4-209ENST00000471165 ACTR10Q9NZ32 417 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 HDAC5Q9UQL6 1122 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 TRAF6Q9Y4K3 522 aa4.4□□□□□ -1.71
CLIP4-209ENST00000471165 INSIG1O15503 277 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 RASGRP1O95267 797 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 FGFR1P11362 822 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 ITPKBP27987 946 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 SDHAP31040 664 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 ZNF326Q5BKZ1 582 aaKnown RBP4.39□□□□□ -1.71
CLIP4-209ENST00000471165 AKNAD1Q5T1N1 836 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 ZNF626Q68DY1 528 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 FSTL4Q6MZW2 842 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 EEPD1Q7L9B9 569 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 GPR149Q86SP6 731 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 RTN4RL1Q86UN2 441 aaPredicted RBP4.39□□□□□ -1.71
CLIP4-209ENST00000471165 HASPINQ8TF76 798 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 FOXRED1Q96CU9 486 aaPredicted RBP4.39□□□□□ -1.71
CLIP4-209ENST00000471165 LRIT1Q9P2V4 623 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 ZNF112Q9UJU3 913 aa4.39□□□□□ -1.71
CLIP4-209ENST00000471165 SMAD7O15105 426 aaKnown RBP4.38□□□□□ -1.71
CLIP4-209ENST00000471165 SPATA31D3P0C874 917 aa4.38□□□□□ -1.71
CLIP4-209ENST00000471165 SNHG28P0DPA3 235 aa4.38□□□□□ -1.71
CLIP4-209ENST00000471165 PABPC1P11940 636 aaKnown RBP4.38□□□□□ -1.71
CLIP4-209ENST00000471165 CCKARP32238 428 aa4.38□□□□□ -1.71
CLIP4-209ENST00000471165 MRPS35P82673 323 aaKnown RBP4.38□□□□□ -1.71
CLIP4-209ENST00000471165 MIDNQ504T8 468 aa4.38□□□□□ -1.71
CLIP4-209ENST00000471165 CATSPEREQ5SY80 951 aa4.38□□□□□ -1.71
CLIP4-209ENST00000471165 SPATA31D4Q6ZUB0 917 aa4.38□□□□□ -1.71
CLIP4-209ENST00000471165 GIPC2Q8TF65 315 aa4.38□□□□□ -1.71
CLIP4-209ENST00000471165 AARSD1Q9BTE6 412 aaKnown RBP4.38□□□□□ -1.71
CLIP4-209ENST00000471165 STRIP2Q9ULQ0 834 aa4.38□□□□□ -1.71
CLIP4-209ENST00000471165 EIF4G1Q04637 1599 aaKnown RBP4.37□□□□□ -1.71
CLIP4-209ENST00000471165 CDKL5O76039 1030 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 FOSP01100 380 aaPredicted RBP4.37□□□□□ -1.71
CLIP4-209ENST00000471165 GJA8P48165 433 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 RGS3P49796 1198 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 TUBA4AP68366 448 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 LACTBP83111 547 aaPredicted RBP4.37□□□□□ -1.71
CLIP4-209ENST00000471165 NSMFQ6X4W1 530 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 DPH6Q7L8W6 267 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 MTDHQ86UE4 582 aaKnown RBP4.37□□□□□ -1.71
CLIP4-209ENST00000471165 ZDHHC17Q8IUH5 632 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 VGLL2Q8N8G2 317 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 ACTRT2Q8TDY3 377 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 RPL36ALQ969Q0 106 aaKnown RBP4.37□□□□□ -1.71
CLIP4-209ENST00000471165 SEC16BQ96JE7 1060 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 UROC1Q96N76 676 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 KCMF1Q9P0J7 381 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 FPGT-TNNI3KV9GXZ4 949 aa4.37□□□□□ -1.71
CLIP4-209ENST00000471165 B4E1Z4 1266 aa4.36□□□□□ -1.71
CLIP4-209ENST00000471165 MOSPD3O75425 235 aa4.36□□□□□ -1.71
CLIP4-209ENST00000471165 PRKCGP05129 697 aa4.36□□□□□ -1.71
CLIP4-209ENST00000471165 SRGAP2CP0DJJ0 459 aa4.36□□□□□ -1.71
CLIP4-209ENST00000471165 POLGP54098 1239 aaPredicted RBP4.36□□□□□ -1.71
CLIP4-209ENST00000471165 IFRD2Q12894 506 aaPredicted RBP4.36□□□□□ -1.71
CLIP4-209ENST00000471165 MRPL49Q13405 166 aaKnown RBP4.36□□□□□ -1.71
CLIP4-209ENST00000471165 ARMC6Q6NXE6 501 aa4.36□□□□□ -1.71
CLIP4-209ENST00000471165 BTNL9Q6UXG8 535 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms