RNA–Protein interactions for RNA: ENST00000470578.1

PKDCC-203, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 3

Gene PKDCC, Length 765 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-203ENST00000470578 GLB1LQ6UWU2 654 aa18.01■□□□□ 0.47
PKDCC-203ENST00000470578 PGBD4Q96DM1 585 aa18.01■□□□□ 0.47
PKDCC-203ENST00000470578 MRPL38Q96DV4 380 aaKnown RBP18.01■□□□□ 0.47
PKDCC-203ENST00000470578 ZNF396Q96N95 335 aaPredicted RBP18.01■□□□□ 0.47
PKDCC-203ENST00000470578 TRIM6Q9C030 488 aaPredicted RBP18.01■□□□□ 0.47
PKDCC-203ENST00000470578 FBXO2Q9UK22 296 aaPredicted RBP18.01■□□□□ 0.47
PKDCC-203ENST00000470578 INPP5FQ9Y2H2 1132 aa18.01■□□□□ 0.47
PKDCC-203ENST00000470578 PCDHB12Q9Y5F1 795 aa18.01■□□□□ 0.47
PKDCC-203ENST00000470578 CNTNAP2Q9UHC6 1331 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 MEIS3P2A8K0S8 358 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 ZNF623O75123 536 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 F13A1P00488 732 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 PRKCBP05771 671 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 TXLNAP40222 546 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 RAD51AP2Q09MP3 1159 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 STK38Q15208 465 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 MAPK6Q16659 721 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 SPECC1Q5M775 1068 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 UBXN11Q5T124 520 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 C1orf186Q6ZWK4 172 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 SYT2Q8N9I0 419 aaPredicted RBP18■□□□□ 0.47
PKDCC-203ENST00000470578 KLHL23Q8NBE8 558 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 COLGALT1Q8NBJ5 622 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 P2RX5Q93086 422 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 PRIMPOLQ96LW4 560 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 TIPINQ9BVW5 301 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 EIF2AQ9BY44 585 aaKnown RBP18■□□□□ 0.47
PKDCC-203ENST00000470578 CWH43Q9H720 699 aa18■□□□□ 0.47
PKDCC-203ENST00000470578 ALG13Q9NP73 1137 aaKnown RBP18■□□□□ 0.47
PKDCC-203ENST00000470578 SRPRBQ9Y5M8 271 aaKnown RBP18■□□□□ 0.47
PKDCC-203ENST00000470578 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 CCDC169A6NNP5 214 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 GRM6O15303 877 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 ITGB1P05556 798 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 GUCY2CP25092 1073 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 NASPP49321 788 aaPredicted RBP17.99■□□□□ 0.47
PKDCC-203ENST00000470578 SLC12A3P55017 1021 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 PEX3P56589 373 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 PRPF4BQ13523 1007 aaKnown RBP17.99■□□□□ 0.47
PKDCC-203ENST00000470578 PKP1Q13835 747 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 SLC39A14Q15043 492 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 CSPP1Q1MSJ5 1256 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 FOXD4L6Q3SYB3 417 aaPredicted RBP17.99■□□□□ 0.47
PKDCC-203ENST00000470578 NAALADL2Q58DX5 795 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 FOXD4L3Q6VB84 417 aaPredicted RBP17.99■□□□□ 0.47
PKDCC-203ENST00000470578 LRRC55Q6ZSA7 311 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 CDR2LQ86X02 465 aaPredicted RBP17.99■□□□□ 0.47
PKDCC-203ENST00000470578 THNSL1Q8IYQ7 743 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 DAW1Q8N136 415 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 KRI1Q8N9T8 703 aaKnown RBP17.99■□□□□ 0.47
PKDCC-203ENST00000470578 RSPH1Q8WYR4 309 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 SYMPKQ92797 1274 aaKnown RBP17.99■□□□□ 0.47
PKDCC-203ENST00000470578 EPSTI1Q96J88 318 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 CLIC6Q96NY7 704 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 LMAN2LQ9H0V9 348 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 RSAD1Q9HA92 442 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 KCND2Q9NZV8 630 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 THEGQ9P2T0 379 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 PLAGL2Q9UPG8 496 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 IPPQ9Y573 584 aa17.99■□□□□ 0.47
PKDCC-203ENST00000470578 PHLPP2Q6ZVD8 1323 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 BRWD1Q9NSI6 2320 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 NPTXRO95502 500 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 ITGA4P13612 1032 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 NCLP19338 710 aaKnown RBP17.98■□□□□ 0.47
PKDCC-203ENST00000470578 EFNA5P52803 228 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 MAPK7Q13164 816 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 DHX8Q14562 1220 aaKnown RBP17.98■□□□□ 0.47
PKDCC-203ENST00000470578 FAM187BQ17R55 369 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 NOMO2Q5JPE7 1267 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 SLC27A1Q6PCB7 646 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 GPBP1Q86WP2 473 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 HACE1Q8IYU2 909 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 URGCPQ8TCY9 931 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 APOL6Q9BWW8 343 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 CCSER1Q9C0I3 900 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 CCDC113Q9H0I3 377 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 FZD8Q9H461 694 aa17.98■□□□□ 0.47
PKDCC-203ENST00000470578 MORC2Q9Y6X9 1032 aaPredicted RBP17.98■□□□□ 0.47
PKDCC-203ENST00000470578 N4BP3O15049 544 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 ZC3H11AO75152 810 aaKnown RBP eCLIP17.97■□□□□ 0.474e-7■■■■□ 24.6
PKDCC-203ENST00000470578 PBX3P40426 434 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 NPTX2P47972 431 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
PKDCC-203ENST00000470578 RNASELQ05823 741 aaKnown RBP17.97■□□□□ 0.47
PKDCC-203ENST00000470578 AGMOQ6ZNB7 445 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 USP49Q70CQ1 688 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 MRPL10Q7Z7H8 261 aaKnown RBP17.97■□□□□ 0.47
PKDCC-203ENST00000470578 SMG8Q8ND04 991 aaKnown RBP17.97■□□□□ 0.47
PKDCC-203ENST00000470578 LRRC15Q8TF66 581 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 LARP4BQ92615 738 aaKnown RBP17.97■□□□□ 0.47
PKDCC-203ENST00000470578 RAD54LQ92698 747 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 ZNF558Q96NG5 402 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 NXF3Q9H4D5 531 aaKnown RBP17.97■□□□□ 0.47
PKDCC-203ENST00000470578 KMT5AQ9NQR1 393 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 BLOC1S4Q9NUP1 217 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 CCDC39Q9UFE4 941 aa17.97■□□□□ 0.47
PKDCC-203ENST00000470578 HES2Q9Y543 173 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms