RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 ZNF558Q96NG5 402 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 PHF7Q9BWX1 381 aaPredicted RBP12.87□□□□□ -0.35
HLA-C-206ENST00000470363 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
HLA-C-206ENST00000470363 DHX33Q9H6R0 707 aaKnown RBP12.87□□□□□ -0.35
HLA-C-206ENST00000470363 CYP26B1Q9NR63 512 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 DACT1Q9NYF0 836 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 SPG21Q9NZD8 308 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
HLA-C-206ENST00000470363 MUC6Q6W4X9 2439 aa12.87□□□□□ -0.35
HLA-C-206ENST00000470363 TECTAO75443 2155 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 GOLGA6L22H0YM25 854 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 SPTLC2O15270 562 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 YEATS4O95619 227 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 P4HBP07237 508 aaKnown RBP12.86□□□□□ -0.35
HLA-C-206ENST00000470363 GCFC2P16383 781 aaKnown RBP12.86□□□□□ -0.35
HLA-C-206ENST00000470363 HOXA11P31270 313 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-206ENST00000470363 PPM1AP35813 382 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 DNM2P50570 870 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 ANKRD54Q6NXT1 300 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 TMEM173Q86WV6 379 aaPredicted RBP12.86□□□□□ -0.35
HLA-C-206ENST00000470363 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 TCF25Q9BQ70 676 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
HLA-C-206ENST00000470363 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
HLA-C-206ENST00000470363 C2orf71A6NGG8 1288 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 ZBTB39O15060 712 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 B4GALT3O60512 393 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 OFD1O75665 1012 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 BCAR1P56945 870 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 GRIN1Q05586 938 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 PTGDRQ13258 359 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 EPHA7Q15375 998 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 PLPP4Q5VZY2 271 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 BMP8AQ7Z5Y6 402 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 MRPL10Q7Z7H8 261 aaKnown RBP12.85□□□□□ -0.35
HLA-C-206ENST00000470363 ABI1Q8IZP0 508 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 C4orf32Q8N8J7 132 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 TMEM87AQ8NBN3 555 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 PRPF31Q8WWY3 499 aaKnown RBP12.85□□□□□ -0.35
HLA-C-206ENST00000470363 RSPH1Q8WYR4 309 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 CLIC6Q96NY7 704 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 INO80BQ9C086 356 aaPredicted RBP12.85□□□□□ -0.35
HLA-C-206ENST00000470363 MINDY3Q9H8M7 445 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 FAM105AQ9NUU6 356 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 PCDHA7Q9UN72 937 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 PPME1Q9Y570 386 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 IRAK3Q9Y616 596 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
HLA-C-206ENST00000470363 NT5C1B-RDH14C9J2C7 533 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 SLITRK3O94933 977 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 HOXB8P17481 243 aaPredicted RBP12.84□□□□□ -0.35
HLA-C-206ENST00000470363 SFPQP23246 707 aaKnown RBP eCLIP12.84□□□□□ -0.35
HLA-C-206ENST00000470363 ME1P48163 572 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 KRT17Q04695 432 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 UBXN11Q5T124 520 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 AGMOQ6ZNB7 445 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 RNF169Q8NCN4 708 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 BCL7CQ8WUZ0 217 aaPredicted RBP12.84□□□□□ -0.35
HLA-C-206ENST00000470363 LPPQ93052 612 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 SCLT1Q96NL6 688 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 HSD17B14Q9BPX1 270 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 JPH2Q9BR39 696 aaPredicted RBP12.84□□□□□ -0.35
HLA-C-206ENST00000470363 VN1R3Q9BXE9 311 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 MRPL9Q9BYD2 267 aaKnown RBP12.84□□□□□ -0.35
HLA-C-206ENST00000470363 KCNH6Q9H252 994 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 NRDE2Q9H7Z3 1164 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 AGPAT5Q9NUQ2 364 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 TBC1D13Q9NVG8 400 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 FBXO2Q9UK22 296 aaPredicted RBP12.84□□□□□ -0.35
HLA-C-206ENST00000470363 COL4A3BPQ9Y5P4 624 aa12.84□□□□□ -0.35
HLA-C-206ENST00000470363 ZNF318Q5VUA4 2279 aa12.83□□□□□ -0.35
HLA-C-206ENST00000470363 NEMFO60524 1076 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 CLASP2O75122 1294 aaKnown RBP12.83□□□□□ -0.36
HLA-C-206ENST00000470363 PPP6R2O75170 966 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 GALTP07902 379 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 SKIP12755 728 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 YWHABP31946 246 aaKnown RBP12.83□□□□□ -0.36
HLA-C-206ENST00000470363 TECP42680 631 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 ALDH7A1P49419 539 aaKnown RBP12.83□□□□□ -0.36
HLA-C-206ENST00000470363 AFF1P51825 1210 aaKnown RBP12.83□□□□□ -0.36
HLA-C-206ENST00000470363 ZXDAP98168 799 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 ATP2C1P98194 919 aaPredicted RBP12.83□□□□□ -0.36
HLA-C-206ENST00000470363 LAMTOR4Q0VGL1 99 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 IL17AQ16552 155 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 TRIM67Q6ZTA4 783 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 TMC7Q7Z402 723 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 DDX53Q86TM3 631 aaKnown RBP12.83□□□□□ -0.36
HLA-C-206ENST00000470363 ZNF280BQ86YH2 543 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 KCNG4Q8TDN1 519 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 TMEM143Q96AN5 459 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 IGSF21Q96ID5 467 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 CEP170P1Q96L14 293 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 FBXL18Q96ME1 805 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 ZBP1Q9H171 429 aa12.83□□□□□ -0.36
HLA-C-206ENST00000470363 XPNPEP1Q9NQW7 623 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms