RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 VSTM4Q8IW00 320 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 DRC7Q8IY82 874 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 XXYLT1Q8NBI6 393 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 ARRDC4Q8NCT1 418 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
COL4A5-203ENST00000470339 FZD8Q9H461 694 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 TAB2Q9NYJ8 693 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 HDAC6Q9UBN7 1215 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 ARMCX3Q9UH62 379 aaPredicted RBP16.56■□□□□ 0.24
COL4A5-203ENST00000470339 AKT3Q9Y243 479 aa16.56■□□□□ 0.24
COL4A5-203ENST00000470339 ANKRD63C9JTQ0 380 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 HNRNPDLO14979 420 aaKnown RBP16.55■□□□□ 0.24
COL4A5-203ENST00000470339 AKAP3O75969 853 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 CYP2C9P11712 490 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 PBX1P40424 430 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 LIG4P49917 911 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 PTPN11Q06124 597 aaPredicted RBP16.55■□□□□ 0.24
COL4A5-203ENST00000470339 ENPEPQ07075 957 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 VWA3BQ502W6 1294 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 MIIPQ5JXC2 388 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 ARMCX5Q6P1M9 558 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 TAF2Q6P1X5 1199 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 BORCS6Q96GS4 357 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 MRPL4Q9BYD3 311 aaKnown RBP16.55■□□□□ 0.24
COL4A5-203ENST00000470339 IKZF4Q9H2S9 585 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 IFT122Q9HBG6 1241 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 KIAA1586Q9HCI6 787 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 HSPBP1Q9NZL4 362 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 GTF2IRD1Q9UHL9 959 aa16.55■□□□□ 0.24
COL4A5-203ENST00000470339 A0A1W2PQC6 194 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 ACKR2O00590 384 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 EXOC3O60645 756 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 HSPA1AP0DMV8 641 aaKnown RBP16.54■□□□□ 0.24
COL4A5-203ENST00000470339 HSPA1BP0DMV9 641 aaKnown RBP16.54■□□□□ 0.24
COL4A5-203ENST00000470339 ADSSP30520 456 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 CYP2J2P51589 502 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 GPC3P51654 580 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 ACLYP53396 1101 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 UBXN1Q04323 297 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 PCBP1Q15365 356 aaKnown RBP eCLIP16.54■□□□□ 0.244e-6■■■■■ 41.5
COL4A5-203ENST00000470339 HS1BP3Q53T59 392 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 CEP135Q66GS9 1140 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 SPECC1LQ69YQ0 1117 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 SLC39A4Q6P5W5 647 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 ZBTB10Q96DT7 871 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 BICD1Q96G01 975 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 PRIMPOLQ96LW4 560 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 FBXL18Q96ME1 805 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 NLRP4Q96MN2 994 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL4A5-203ENST00000470339 NDST4Q9H3R1 872 aa16.54■□□□□ 0.24
COL4A5-203ENST00000470339 PRMT7Q9NVM4 692 aaPredicted RBP16.54■□□□□ 0.24
COL4A5-203ENST00000470339 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL4A5-203ENST00000470339 ITIH6Q6UXX5 1313 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 A0A087WZ62 844 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 TEX33O43247 280 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 TREHO43280 583 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 VTNP04004 478 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 PRKCBP05771 671 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 GJB1P08034 283 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 CASP4P49662 377 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 MBTD1Q05BQ5 628 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 HIC1Q14526 733 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 FKBP15Q5T1M5 1219 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 INTS8Q75QN2 995 aaKnown RBP16.53■□□□□ 0.24
COL4A5-203ENST00000470339 RPAINQ86UA6 219 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 POMGNT1Q8WZA1 660 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 ERGIC2Q96RQ1 377 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
COL4A5-203ENST00000470339 FDXACB1Q9BRP7 624 aaPredicted RBP16.53■□□□□ 0.24
COL4A5-203ENST00000470339 CBWD1Q9BRT8 395 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 ADAMTS10Q9H324 1103 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 HTTP42858 3142 aa16.53■□□□□ 0.24
COL4A5-203ENST00000470339 A0A0B4J269 797 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 GPR32O75388 356 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 TOM1L1O75674 476 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 LDHAP00338 332 aaKnown RBP16.52■□□□□ 0.24
COL4A5-203ENST00000470339 PTMAP06454 111 aaKnown RBP16.52■□□□□ 0.24
COL4A5-203ENST00000470339 GSDMDP57764 484 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 NLRP11P59045 1033 aaKnown RBP16.52■□□□□ 0.24
COL4A5-203ENST00000470339 SLC9C1Q4G0N8 1177 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 TSHZ1Q6ZSZ6 1077 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 TMC6Q7Z403 805 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 SPC24Q8NBT2 197 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 SH3TC2Q8TF17 1288 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 NLRP7Q8WX94 980 aa16.52■□□□□ 0.24
COL4A5-203ENST00000470339 TARS2Q9BW92 718 aaKnown RBP16.52■□□□□ 0.24
COL4A5-203ENST00000470339 GCOM2Q9BZD3 368 aaPredicted RBP16.52■□□□□ 0.24
COL4A5-203ENST00000470339 INO80BQ9C086 356 aaPredicted RBP16.52■□□□□ 0.24
COL4A5-203ENST00000470339 PAK6Q9NQU5 681 aaPredicted RBP16.52■□□□□ 0.24
COL4A5-203ENST00000470339 TISP43B9A030 160 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 INO80B-WBP1J3KQ70 363 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 EXTL3O43909 919 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 KRT13P13646 458 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 TBX2Q13207 712 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms