RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 GUCA1CO95843 209 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 EGFRP00533 1210 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 KRT1P04264 644 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 FAM157BP0CG42 384 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 ALADP13716 330 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 HPGDP15428 266 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 TYRP1P17643 537 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 ATF3P18847 181 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 FUT4P22083 530 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 ALDH3A1P30838 453 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
COL3A1-205ENST00000470167 SOX6P35712 828 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 TM4SF4P48230 202 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 PLCD1P51178 756 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 ALDH18A1P54886 795 aaKnown RBP5.53□□□□□ -1.52
COL3A1-205ENST00000470167 EVCP57679 992 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 IFFO1Q0D2I5 559 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 UBAP2LQ14157 1087 aaKnown RBP5.53□□□□□ -1.52
COL3A1-205ENST00000470167 GRIN2CQ14957 1233 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 PSMD6Q15008 389 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 PCSK7Q16549 785 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 WHAMMP3Q1A5X7 153 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 Q3ZCU0 254 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 CFAP221Q4G0U5 840 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 SLC44A4Q53GD3 710 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 DEPDC1Q5TB30 811 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 MCTP1Q6DN14 999 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 FIGNL1Q6PIW4 674 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 LRSAM1Q6UWE0 723 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 CEP128Q6ZU80 1094 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 BNIPLQ7Z465 357 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 YTHDF3Q7Z739 585 aaKnown RBP5.53□□□□□ -1.52
COL3A1-205ENST00000470167 LUZP1Q86V48 1076 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 SYTL1Q8IYJ3 562 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 XXYLT1Q8NBI6 393 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 KCNH5Q8NCM2 988 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 IPMKQ8NFU5 416 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 TTC8Q8TAM2 541 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 SLC22A8Q8TCC7 542 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 BCAS4Q8TDM0 211 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 ARL8AQ96BM9 186 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 DHX58Q96C10 678 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 TMX3Q96JJ7 454 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 SPATA17Q96L03 361 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 CCDC42Q96M95 316 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 CIB1Q99828 191 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 GAL3ST1Q99999 423 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 GPATCH1Q9BRR8 931 aaKnown RBP5.53□□□□□ -1.52
COL3A1-205ENST00000470167 RIOK1Q9BRS2 568 aaKnown RBP5.53□□□□□ -1.52
COL3A1-205ENST00000470167 PI4K2AQ9BTU6 479 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 HGH1Q9BTY7 390 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 CCDC106Q9BWC9 280 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 MTMR12Q9C0I1 747 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 YIPF3Q9GZM5 350 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 GBA3Q9H227 469 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 HAUS4Q9H6D7 363 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 DCTPP1Q9H773 170 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 EBF2Q9HAK2 575 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 ABCF3Q9NUQ8 709 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 PCMTD2Q9NV79 361 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 SAGE1Q9NXZ1 904 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 ARHGAP28Q9P2N2 729 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 KANSL3Q9P2N6 904 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 MALT1Q9UDY8 824 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 KCNH4Q9UQ05 1017 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 SPG7Q9UQ90 795 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 CAB39Q9Y376 341 aaPredicted RBP5.53□□□□□ -1.52
COL3A1-205ENST00000470167 KIF15Q9NS87 1388 aa5.53□□□□□ -1.52
COL3A1-205ENST00000470167 ARAP1Q96P48 1450 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 A0A1B0GVG6 124 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 LRRD1A4D1F6 860 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 CACNB4O00305 520 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 VWA5AO00534 786 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 APOL1O14791 398 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ZSCAN12O43309 604 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 PEX1O43933 1283 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 RANBP6O60518 1105 aaKnown RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 SASH3O75995 380 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 SEC24DO94855 1032 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 SCGB1D2O95969 90 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 APOEP02649 317 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 CYP2E1P05181 493 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 RETP07949 1114 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 CTSHP09668 335 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 C6orf222P0C671 652 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ATP6V1B1P15313 513 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 PORP16435 677 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 NOS3P29474 1203 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ATP5OP48047 213 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 LIG3P49916 1009 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 KCNQ4P56696 695 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 GNAI1P63096 354 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 RPP38P78345 283 aaKnown RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 CCNA1P78396 465 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 KLC1Q07866 573 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 SQLEQ14534 574 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 SGSM1Q2NKQ1 1148 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ZSCAN23Q3MJ62 389 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ARL13BQ3SXY8 428 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 IGSF11Q5DX21 431 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms