RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.5■□□□□ 0.71
COL7A1-208ENST00000470076 TMEM221A6NGB7 291 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 M0R296 226 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 SLITRK3O94933 977 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 LYPLA2O95372 231 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 CTSAP10619 480 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 HOXA11P31270 313 aaPredicted RBP19.5■□□□□ 0.71
COL7A1-208ENST00000470076 MXD4Q14582 209 aaPredicted RBP19.5■□□□□ 0.71
COL7A1-208ENST00000470076 CALCRLQ16602 461 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 AGMOQ6ZNB7 445 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 NECTIN4Q96NY8 510 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 EIF2AK1Q9BQI3 630 aaKnown RBP19.5■□□□□ 0.71
COL7A1-208ENST00000470076 GBP3Q9H0R5 595 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 ADAM7Q9H2U9 754 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 RSAD1Q9HA92 442 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 KANSL3Q9P2N6 904 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 ZDBF2Q9HCK1 2354 aa19.5■□□□□ 0.71
COL7A1-208ENST00000470076 ZBTB39O15060 712 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 ERLIN2O94905 339 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 LARGE1O95461 756 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 SLC11A1P49279 550 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 UBXN11Q5T124 520 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 CNNM3Q8NE01 707 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 NSUN7Q8NE18 718 aaKnown RBP19.49■□□□□ 0.71
COL7A1-208ENST00000470076 PBXIP1Q96AQ6 731 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 FBXL18Q96ME1 805 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 HSD17B14Q9BPX1 270 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 DZANK1Q9NVP4 752 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 DNAJB4Q9UDY4 337 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 NR2E1Q9Y466 385 aa19.49■□□□□ 0.71
COL7A1-208ENST00000470076 BTBD18B2RXH4 712 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 NCLP19338 710 aaKnown RBP19.48■□□□□ 0.71
COL7A1-208ENST00000470076 AXLP30530 894 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 POU5F1BQ06416 359 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 SIGLEC14Q08ET2 396 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 NCBP1Q09161 790 aaKnown RBP19.48■□□□□ 0.71
COL7A1-208ENST00000470076 TRIM29Q14134 588 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 TFDP1Q14186 410 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 PTPN21Q16825 1174 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 ERICH6BQ5W0A0 696 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 ZNF280BQ86YH2 543 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 DIS3L2Q8IYB7 885 aaKnown RBP19.48■□□□□ 0.71
COL7A1-208ENST00000470076 BCL7CQ8WUZ0 217 aaPredicted RBP19.48■□□□□ 0.71
COL7A1-208ENST00000470076 AUTS2Q8WXX7 1259 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 TMEM175Q9BSA9 504 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 TTC12Q9H892 705 aaPredicted RBP19.48■□□□□ 0.71
COL7A1-208ENST00000470076 UBN1Q9NPG3 1134 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 XPNPEP1Q9NQW7 623 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 ANKEF1Q9NU02 776 aa19.48■□□□□ 0.71
COL7A1-208ENST00000470076 NEMFO60524 1076 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 DGAT1O75907 488 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 ALDH2P05091 517 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 MTHFRP42898 656 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 NEK4P51957 841 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 PTENP60484 403 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 PPFIBP1Q86W92 1011 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 IFNLR1Q8IU57 520 aaPredicted RBP19.47■□□□□ 0.71
COL7A1-208ENST00000470076 CCDC51Q96ER9 411 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 RIPOR3Q96MK2 946 aa19.47■□□□□ 0.71
COL7A1-208ENST00000470076 CCDC43Q96MW1 224 aaKnown RBP19.47■□□□□ 0.71
COL7A1-208ENST00000470076 FAM193BQ96PV7 902 aaPredicted RBP19.47■□□□□ 0.71
COL7A1-208ENST00000470076 B4GALT3O60512 393 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 TSPAN1O60635 241 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 JAK2O60674 1132 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 DDHD2O94830 711 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 ITGA4P13612 1032 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 TXKP42681 527 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 NHLH1Q02575 133 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 PTPN14Q15678 1187 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 NOTUMQ6P988 496 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 SUGP1Q8IWZ8 645 aaKnown RBP19.46■□□□□ 0.71
COL7A1-208ENST00000470076 VN1R3Q9BXE9 311 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 POMKQ9H5K3 350 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 FAN1Q9Y2M0 1017 aa19.46■□□□□ 0.71
COL7A1-208ENST00000470076 INO80B-WBP1J3KQ70 363 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 POMCP01189 267 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 EPCAMP16422 314 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 SP100P23497 879 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-208ENST00000470076 AFF1P51825 1210 aaKnown RBP19.45■□□□□ 0.7
COL7A1-208ENST00000470076 RARS2Q5T160 578 aaKnown RBP19.45■□□□□ 0.7
COL7A1-208ENST00000470076 ZBTB33Q86T24 672 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 FBXL6Q8N531 539 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 SMG8Q8ND04 991 aaKnown RBP19.45■□□□□ 0.7
COL7A1-208ENST00000470076 SLC22A17Q8WUG5 538 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 MTMR9Q96QG7 549 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 TSHZ2Q9NRE2 1034 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 CDH22Q9UJ99 828 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 IPPQ9Y573 584 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 MYO10Q9HD67 2058 aa19.45■□□□□ 0.7
COL7A1-208ENST00000470076 NRP1O14786 923 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 INPPL1O15357 1258 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 XRCC6P12956 609 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL7A1-208ENST00000470076 ARL2P36404 184 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 RARRES1P49788 294 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 CAPSQ13938 189 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 ATAT1Q5SQI0 421 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 KIAA1841Q6NSI8 718 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 PRRX2Q99811 253 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 EMILIN2Q9BXX0 1053 aa19.44■□□□□ 0.7
COL7A1-208ENST00000470076 EIF2AQ9BY44 585 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms