RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 ANKRD20A8PQ5CZ79 823 aa16.8■□□□□ 0.28
BRAT1-204ENST00000469750 ANKRD20A2Q5SQ80 823 aa16.8■□□□□ 0.28
BRAT1-204ENST00000469750 ANKRD20A1Q5TYW2 823 aa16.8■□□□□ 0.28
BRAT1-204ENST00000469750 RNF219Q5W0B1 726 aaPredicted RBP16.8■□□□□ 0.28
BRAT1-204ENST00000469750 TRIM9Q9C026 710 aa16.8■□□□□ 0.28
BRAT1-204ENST00000469750 TPX2Q9ULW0 747 aaKnown RBP16.8■□□□□ 0.28
BRAT1-204ENST00000469750 A8MXQ7 604 aa16.8■□□□□ 0.28
BRAT1-204ENST00000469750 NCF2P19878 526 aaPredicted RBP16.8■□□□□ 0.28
BRAT1-204ENST00000469750 FAM133BQ5BKY9 247 aaKnown RBP16.8■□□□□ 0.28
BRAT1-204ENST00000469750 CNOT7Q9UIV1 285 aaKnown RBP16.8■□□□□ 0.28
BRAT1-204ENST00000469750 PFASO15067 1338 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 TXNP10599 105 aaKnown RBP16.79■□□□□ 0.28
BRAT1-204ENST00000469750 LINC00116Q8NCU8 138 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 OSBPL9Q96SU4 736 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 G3BP2Q9UN86 482 aaKnown RBP16.79■□□□□ 0.28
BRAT1-204ENST00000469750 KIAA0391O15091 583 aaKnown RBP16.79■□□□□ 0.28
BRAT1-204ENST00000469750 SPARCL1Q14515 664 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 PDXDC1Q6P996 788 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 ELMOD1Q8N336 334 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 MAML1Q92585 1016 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-204ENST00000469750 SPATA31A6Q5VVP1 1343 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 SMIM24O75264 130 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 NMT1P30419 496 aaKnown RBP16.79■□□□□ 0.28
BRAT1-204ENST00000469750 ART3Q13508 389 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 NUGGCQ68CJ6 796 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 ANKRD40Q6AI12 368 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 CDC42EP5Q6NZY7 148 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 METTL16Q86W50 562 aaKnown RBP16.79■□□□□ 0.28
BRAT1-204ENST00000469750 GLYCTKQ8IVS8 523 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 RNF149Q8NC42 400 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 KIF12Q96FN5 646 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 FGD4Q96M96 766 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 ELP3Q9H9T3 547 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 GRID2IPA4D2P6 1211 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 C19orf81C9J6K1 198 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 GSTA4O15217 222 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 CREB3O43889 395 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 NTSR2O95665 410 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 ZNF211Q13398 564 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-204ENST00000469750 RHOT1Q8IXI2 618 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 TSPYL2Q9H2G4 693 aaPredicted RBP16.79■□□□□ 0.28
BRAT1-204ENST00000469750 HPCAL4Q9UM19 191 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
BRAT1-204ENST00000469750 CCDC144BQ3MJ40 725 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 XKR3Q5GH77 459 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 CRLF3Q8IUI8 442 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 WNT8AQ9H1J5 351 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 DDX56Q9NY93 547 aaKnown RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 HSPA4LO95757 839 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 PNMA6AP0CW24 399 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 CHRNA3P32297 505 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 TKFCQ3LXA3 575 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 KIAA1755Q5JYT7 1200 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 GANCQ8TET4 914 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 RFFLQ8WZ73 363 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 EXT2Q93063 718 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 ACAP3Q96P50 834 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.78■□□□□ 0.288e-8■■□□□ 14.3
BRAT1-204ENST00000469750 A0A087WUV0 522 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 TBX3O15119 743 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 DGAT1O75907 488 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 ADORA2BP29275 332 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 NR1H3Q13133 447 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 KLHL38Q2WGJ6 581 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 EFHC2Q5JST6 749 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 NFRKBQ6P4R8 1299 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 SCG3Q8WXD2 468 aaKnown RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 ABCF3Q9NUQ8 709 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 PDS5AQ29RF7 1337 aaKnown RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 SLC16A3O15427 465 aaKnown RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 ESRRAP11474 423 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 LRRC23Q53EV4 343 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 FAM102AQ5T9C2 384 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 ICE2Q659A1 982 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 CLEC17AQ6ZS10 378 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 TTC17Q96AE7 1141 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 IFT43Q96FT9 208 aa16.78■□□□□ 0.28
BRAT1-204ENST00000469750 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-204ENST00000469750 PRKCBP05771 671 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 BAATQ14032 418 aaPredicted RBP16.77■□□□□ 0.28
BRAT1-204ENST00000469750 PPP1R9AQ9ULJ8 1098 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 LMTK2Q8IWU2 1503 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 RASA4BC9J798 803 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 RASA4O43374 803 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 NCK2O43639 380 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 MGEA5O60502 916 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 TMPRSS15P98073 1019 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 HEATR6Q6AI08 1181 aaKnown RBP16.77■□□□□ 0.28
BRAT1-204ENST00000469750 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 CAPN11Q9UMQ6 739 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 CEP152O94986 1710 aa16.77■□□□□ 0.28
BRAT1-204ENST00000469750 MAPK13O15264 365 aa16.77■□□□□ 0.27
BRAT1-204ENST00000469750 BCAR1P56945 870 aa16.77■□□□□ 0.27
BRAT1-204ENST00000469750 OCRLQ01968 901 aa16.77■□□□□ 0.27
BRAT1-204ENST00000469750 C1orf228Q6PIY5 440 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms