RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 SLITRK3O94933 977 aa19.5■□□□□ 0.71
MRPL28-208ENST00000469744 ZSCAN20P17040 1043 aaPredicted RBP19.5■□□□□ 0.71
MRPL28-208ENST00000469744 TIGD5Q53EQ6 642 aa19.5■□□□□ 0.71
MRPL28-208ENST00000469744 XKR9Q5GH70 373 aa19.5■□□□□ 0.71
MRPL28-208ENST00000469744 TCEAL5Q5H9L2 206 aa19.5■□□□□ 0.71
MRPL28-208ENST00000469744 RNF169Q8NCN4 708 aa19.5■□□□□ 0.71
MRPL28-208ENST00000469744 TMEM161AQ9NX61 479 aa19.5■□□□□ 0.71
MRPL28-208ENST00000469744 A0A087WWV3 80 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 BMP1P13497 986 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 FAM189BP81408 668 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 EMC2Q15006 297 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 ZNF174Q15697 407 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 AAK1Q2M2I8 961 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 SPOUT1Q5T280 376 aaKnown RBP19.49■□□□□ 0.71
MRPL28-208ENST00000469744 KANK3Q6NY19 840 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 KRBA2Q6ZNG9 492 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 CLIC6Q96NY7 704 aa19.49■□□□□ 0.71
MRPL28-208ENST00000469744 JPH2Q9BR39 696 aaPredicted RBP19.49■□□□□ 0.71
MRPL28-208ENST00000469744 DHX33Q9H6R0 707 aaKnown RBP19.49■□□□□ 0.71
MRPL28-208ENST00000469744 BECN2A8MW95 431 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 ITGB1P05556 798 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 ZNF75DP51815 510 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 OTUD6AQ7L8S5 288 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 ZNF410Q86VK4 478 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 ECHDC2Q86YB7 292 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 KLHL23Q8NBE8 558 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 HSD17B14Q9BPX1 270 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 PLVAPQ9BX97 442 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 NSUN3Q9H649 340 aaKnown RBP19.48■□□□□ 0.71
MRPL28-208ENST00000469744 UBE2ZQ9H832 354 aaPredicted RBP19.48■□□□□ 0.71
MRPL28-208ENST00000469744 RNF19AQ9NV58 838 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 PLAGL2Q9UPG8 496 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 COL4A3BPQ9Y5P4 624 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 KCNA5P22460 613 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 DNAJB1P25685 340 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 RFC5P40937 340 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 EP400NLQ6ZTU2 488 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 DHX40Q8IX18 779 aaKnown RBP19.48■□□□□ 0.71
MRPL28-208ENST00000469744 PRPF31Q8WWY3 499 aaKnown RBP19.48■□□□□ 0.71
MRPL28-208ENST00000469744 UHRF1Q96T88 793 aaPredicted RBP19.48■□□□□ 0.71
MRPL28-208ENST00000469744 ELAC1Q9H777 363 aaKnown RBP19.48■□□□□ 0.71
MRPL28-208ENST00000469744 IFT122Q9HBG6 1241 aa19.48■□□□□ 0.71
MRPL28-208ENST00000469744 TYW1Q9NV66 732 aaKnown RBP19.48■□□□□ 0.71
MRPL28-208ENST00000469744 RNF216Q9NWF9 866 aaPredicted RBP19.48■□□□□ 0.71
MRPL28-208ENST00000469744 SMTNL1A8MU46 457 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 SRGAP2CP0DJJ0 459 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 SFPQP23246 707 aaKnown RBP eCLIP19.47■□□□□ 0.71
MRPL28-208ENST00000469744 CDC42EP1Q00587 391 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 LAMTOR4Q0VGL1 99 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 CAMK1Q14012 370 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 LONRF3Q496Y0 759 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 TTC38Q5R3I4 469 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 FAM43BQ6ZT52 329 aaPredicted RBP19.47■□□□□ 0.71
MRPL28-208ENST00000469744 CATSPER4Q7RTX7 472 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 CNNM3Q8NE01 707 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 PIGOQ8TEQ8 1089 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 PSPC1Q8WXF1 523 aaKnown RBP19.47■□□□□ 0.71
MRPL28-208ENST00000469744 P2RX5Q93086 422 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 CCDC34Q96HJ3 373 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 CASD1Q96PB1 797 aa19.47■□□□□ 0.71
MRPL28-208ENST00000469744 PIN4Q9Y237 131 aaKnown RBP19.47■□□□□ 0.71
MRPL28-208ENST00000469744 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.47■□□□□ 0.71
MRPL28-208ENST00000469744 OR52Z1P0C646 297 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 ATF7P17544 494 aaPredicted RBP19.46■□□□□ 0.71
MRPL28-208ENST00000469744 TECP42680 631 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 CLLU1OSQ5K130 101 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 SPPL3Q8TCT6 385 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 NEK9Q8TD19 979 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 MRFAP1L1Q96HT8 127 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 MTRQ99707 1265 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 TRIM5Q9C035 493 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 LMAN2LQ9H0V9 348 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 MINDY3Q9H8M7 445 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 XPNPEP1Q9NQW7 623 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 PPME1Q9Y570 386 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 PCDHGC5Q9Y5F6 944 aa19.46■□□□□ 0.71
MRPL28-208ENST00000469744 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.45■□□□□ 0.7
MRPL28-208ENST00000469744 A0A0U1RQF3 1178 aa19.45■□□□□ 0.7
MRPL28-208ENST00000469744 IKBKBO14920 756 aa19.45■□□□□ 0.7
MRPL28-208ENST00000469744 GTF2F1P35269 517 aaKnown RBP eCLIP19.45■□□□□ 0.73e-13■■□□□ 14.3
MRPL28-208ENST00000469744 ATP2C1P98194 919 aaPredicted RBP19.45■□□□□ 0.7
MRPL28-208ENST00000469744 TWF2Q6IBS0 349 aaKnown RBP19.45■□□□□ 0.7
MRPL28-208ENST00000469744 LRRC55Q6ZSA7 311 aa19.45■□□□□ 0.7
MRPL28-208ENST00000469744 ABI1Q8IZP0 508 aa19.45■□□□□ 0.7
MRPL28-208ENST00000469744 COLGALT1Q8NBJ5 622 aa19.45■□□□□ 0.7
MRPL28-208ENST00000469744 RNF149Q8NC42 400 aa19.45■□□□□ 0.7
MRPL28-208ENST00000469744 CCDC43Q96MW1 224 aaKnown RBP19.45■□□□□ 0.7
MRPL28-208ENST00000469744 PYM1Q9BRP8 204 aaKnown RBP19.45■□□□□ 0.7
MRPL28-208ENST00000469744 INO80BQ9C086 356 aaPredicted RBP19.45■□□□□ 0.7
MRPL28-208ENST00000469744 TMEM117Q9H0C3 514 aa19.45■□□□□ 0.7
MRPL28-208ENST00000469744 CWH43Q9H720 699 aa19.45■□□□□ 0.7
MRPL28-208ENST00000469744 H3BQ06 376 aaPredicted RBP19.44■□□□□ 0.7
MRPL28-208ENST00000469744 MED24O75448 989 aa19.44■□□□□ 0.7
MRPL28-208ENST00000469744 LYPLA2O95372 231 aa19.44■□□□□ 0.7
MRPL28-208ENST00000469744 SPATA31C1P0DKV0 1188 aa19.44■□□□□ 0.7
MRPL28-208ENST00000469744 IRS1P35568 1242 aa19.44■□□□□ 0.7
MRPL28-208ENST00000469744 PBX3P40426 434 aa19.44■□□□□ 0.7
MRPL28-208ENST00000469744 TPM4P67936 248 aa19.44■□□□□ 0.7
MRPL28-208ENST00000469744 ZNF598Q86UK7 904 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms