RNA–Protein interactions for RNA: ENST00000469641.5

ATP13A1-205, Transcript of ATPase 13A1, human

TSL 2

Gene ATP13A1, Length 4,241 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP13A1-205	ENST00000469641	LIN9	Q5TKA1	542 aa		11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	KAZN	Q674X7	775 aa		11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	TTI2	Q6NXR4	508 aa		11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PALM2	Q8IXS6	379 aa		11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	CEP120	Q8N960	986 aa		11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	HDAC7	Q8WUI4	952 aa		11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	TYW1	Q9NV66	732 aa	Known RBP	11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NYAP2	Q9P242	653 aa		11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	FAF1	Q9UNN5	650 aa	Predicted RBP	11.31	□□□□□ -0.6
ATP13A1-205	ENST00000469641	CASQ2	O14958	399 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ECEL1	O95672	775 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NMT1	P30419	496 aa	Known RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	COASY	Q13057	564 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	TRPC3	Q13507	836 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	C9orf131	Q5VYM1	1079 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	SESTD1	Q86VW0	696 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MSL3	Q8N5Y2	521 aa	Known RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	RUBCN	Q92622	972 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NACC1	Q96RE7	527 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PNMA2	Q9UL42	364 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NOC2L	Q9Y3T9	749 aa	Known RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PMS1	P54277	932 aa	Known RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MYL7	Q01449	175 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	CEP55	Q53EZ4	464 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ERGIC2	Q96RQ1	377 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	WDR11	Q9BZH6	1224 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	DONSON	Q9NYP3	566 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	hCG_2014768	A0A024R1R8	64 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	SLC16A4	O15374	487 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PSMC2	P35998	433 aa	Known RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	DMP1	Q13316	513 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	CRY2	Q49AN0	593 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	TMCO4	Q5TGY1	634 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MAP1S	Q66K74	1059 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MOB2	Q70IA6	237 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MAIP1	Q8WWC4	291 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	SLC7A3	Q8WY07	619 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ZNF653	Q96CK0	615 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PARVG	Q9HBI0	331 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	GABBR1	Q9UBS5	961 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	CFAP73	A6NFT4	308 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MAP3K7	O43318	606 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	RAD51C	O43502	376 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	KLRC1	P26715	233 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	CCDC89	Q8N998	374 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MED15	Q96RN5	788 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NUDCD1	Q96RS6	583 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	C7orf25	Q9BPX7	421 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	FEM1B	Q9UK73	627 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PLAGL2	Q9UPG8	496 aa		11.3	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ASTN2	O75129	1339 aa	Predicted RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641		A0A1W2PQJ5	194 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MYMK	A6NI61	221 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NFIB	O00712	420 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	CAP2	P40123	477 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NT5C2	P49902	561 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PMS2	P54278	862 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NPEPPS	P55786	919 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	CCNA1	P78396	465 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	SLC30A9	Q6PML9	568 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	LONP2	Q86WA8	852 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ZNF280C	Q8ND82	737 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MDM1	Q8TC05	714 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ZBTB10	Q96DT7	871 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PURB	Q96QR8	312 aa	Known RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	LXN	Q9BS40	222 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	NOD2	Q9HC29	1040 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	KMT5A	Q9NQR1	393 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ANAPC5	Q9UJX4	755 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	RNF225	M0QZC1	329 aa	Predicted RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	FANCG	O15287	622 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	TTI1	O43156	1089 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PEX10	O60683	326 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	RPS6	P62753	249 aa	Known RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MKRN4P	Q13434	485 aa	Predicted RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	TMED1	Q13445	227 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	DBN1	Q16643	649 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	C10orf76	Q5T2E6	689 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	RAD54L	Q92698	747 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.29	□□□□□ -0.6	2e-6	■■■□□ 15.8
ATP13A1-205	ENST00000469641	MAK16	Q9BXY0	300 aa	Known RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	DNAI2	Q9GZS0	605 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	BATF3	Q9NR55	127 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ROBO1	Q9Y6N7	1651 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	EXOC1L	A0A1B0GW35	172 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	MAPK13	O15264	365 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	ACTN1	P12814	892 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	BRAF	P15056	766 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	OSBP	P22059	807 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	AARS	P49588	968 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PLA2G4F	Q68DD2	849 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	PADI6	Q6TGC4	694 aa		11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.29	□□□□□ -0.6
ATP13A1-205	ENST00000469641	GLYCTK	Q8IVS8	523 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms