RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 ARHGEF35A5YM69 484 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 MEIS3P2A8K0S8 358 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 HIDE1A8MVS5 230 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 PI4K2BG5E9Z4 385 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 TSPAN1O60635 241 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 EYA4O95677 639 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 CXCL14O95715 111 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 ALDH2P05091 517 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 GALTP07902 379 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 ITGA4P13612 1032 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 ALADP13716 330 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 GLRA2P23416 452 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 MCM2P49736 904 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 COASYQ13057 564 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 CAPSQ13938 189 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 PDIA5Q14554 519 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 NBR1Q14596 966 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 SMC1AQ14683 1233 aaKnown RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 DUSP6Q16828 381 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 UBXN11Q5T124 520 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 HAUS3Q68CZ6 603 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 MCTP1Q6DN14 999 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 NOTUMQ6P988 496 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 AGMOQ6ZNB7 445 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 MRPL10Q7Z7H8 261 aaKnown RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 IFNLR1Q8IU57 520 aaPredicted RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 ADHFE1Q8IWW8 467 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 MRPL43Q8N983 215 aaKnown RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 MCPH1Q8NEM0 835 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 CCDC51Q96ER9 411 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 CPB2Q96IY4 423 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 TMX3Q96JJ7 454 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 MSLNLQ96KJ4 702 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 FAM193BQ96PV7 902 aaPredicted RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 POP1Q99575 1024 aaKnown RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 NFKBIZQ9BYH8 718 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 RAB34Q9BZG1 259 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 TRIM6Q9C030 488 aaPredicted RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 POLR3FQ9H1D9 316 aaPredicted RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 NRDE2Q9H7Z3 1164 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 RSAD1Q9HA92 442 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 CLEC1BQ9P126 229 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 LRWD1Q9UFC0 647 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 BARX2Q9UMQ3 279 aaPredicted RBP7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 STK24Q9Y6E0 443 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 CNTNAP2Q9UHC6 1331 aa7.97□□□□□ -1.13
SNRPD3-205ENST00000468770 PLXNA4Q9HCM2 1894 aa7.96□□□□□ -1.13
SNRPD3-205ENST00000468770 C2orf71A6NGG8 1288 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 LRRIQ4A6NIV6 560 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 H3BQV1 296 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 GLP2RO95838 553 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 POMCP01189 267 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 ARF4P18085 180 aaPredicted RBP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 CYP11B2P19099 503 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 NCLP19338 710 aaKnown RBP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 COL9A1P20849 921 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 MUTP22033 750 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 CCT6AP40227 531 aaKnown RBP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 TOB1P50616 345 aaPredicted RBP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 FXR2P51116 673 aaKnown RBP eCLIP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 RBM10P98175 930 aaKnown RBP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 ZP2Q05996 745 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 MBTD1Q05BQ5 628 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 PTGDRQ13258 359 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 TMEM31Q5JXX7 168 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 LLGL2Q6P1M3 1020 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 POTEGQ6S5H5 508 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 PADI6Q6TGC4 694 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 DDX53Q86TM3 631 aaKnown RBP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 ZNF280BQ86YH2 543 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 ZBTB8OSQ8IWT0 167 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 HACE1Q8IYU2 909 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 VPS52Q8N1B4 723 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 C4orf32Q8N8J7 132 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 SMRP1Q8NCR6 262 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 SMG8Q8ND04 991 aaKnown RBP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 KHSRPQ92945 711 aaKnown RBP eCLIP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 IGSF21Q96ID5 467 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 EIF2AQ9BY44 585 aaKnown RBP7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 CSRNP2Q9H175 543 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 GPRC5CQ9NQ84 441 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 DNAJB4Q9UDY4 337 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 KIAA1024Q9UPX6 916 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 FAN1Q9Y2M0 1017 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 IPPQ9Y573 584 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 PCDHB6Q9Y5E3 794 aa7.96□□□□□ -1.14
SNRPD3-205ENST00000468770 A0A1B0GUA9 196 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 C19orf67A6NJJ6 358 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 LAD1O00515 517 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 NR1I2O75469 434 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 DDHD2O94830 711 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 HOXB8P17481 243 aaPredicted RBP7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 GJB2P29033 226 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 SLC11A1P49279 550 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 AFF1P51825 1210 aaKnown RBP7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 GIT2Q14161 759 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 ECM1Q16610 540 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 AMHR2Q16671 573 aa7.95□□□□□ -1.14
SNRPD3-205ENST00000468770 TMEM132AQ24JP5 1023 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms