RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ZNF623O75123 536 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 ZSCAN20P17040 1043 aaPredicted RBP12.4□□□□□ -0.42
COL4A6-205ENST00000468338 ATF7P17544 494 aaPredicted RBP12.4□□□□□ -0.42
COL4A6-205ENST00000468338 FGFR4P22455 802 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 SFPQP23246 707 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL4A6-205ENST00000468338 PTENP60484 403 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 MXD4Q14582 209 aaPredicted RBP12.4□□□□□ -0.42
COL4A6-205ENST00000468338 ECM1Q16610 540 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 FAM102BQ5T8I3 360 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 HAUS3Q68CZ6 603 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 POTEGQ6S5H5 508 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 BRAPQ7Z569 592 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 ECHDC2Q86YB7 292 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL4A6-205ENST00000468338 GDPD5Q8WTR4 605 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 PBXIP1Q96AQ6 731 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 NLRP4Q96MN2 994 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 NFKBIZQ9BYH8 718 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 MINDY3Q9H8M7 445 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 ATP6V0A4Q9HBG4 840 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 DACT1Q9NYF0 836 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 LRWD1Q9UFC0 647 aa12.4□□□□□ -0.42
COL4A6-205ENST00000468338 MRPL42Q9Y6G3 142 aaKnown RBP12.4□□□□□ -0.42
COL4A6-205ENST00000468338 KIAA1671Q9BY89 1806 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 EOMESO95936 686 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 PDCP20941 246 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 HOXA11P31270 313 aaPredicted RBP12.39□□□□□ -0.43
COL4A6-205ENST00000468338 GATMP50440 423 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 PCBP1Q15365 356 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL4A6-205ENST00000468338 NAALADL2Q58DX5 795 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
COL4A6-205ENST00000468338 DTHD1Q6ZMT9 781 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 RNF149Q8NC42 400 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 LRRN4Q8WUT4 740 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 P2RX5Q93086 422 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 SCLT1Q96NL6 688 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 MMTAG2Q9BU76 263 aaKnown RBP12.39□□□□□ -0.43
COL4A6-205ENST00000468338 RAB34Q9BZG1 259 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 AGPAT5Q9NUQ2 364 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 LRFN2Q9ULH4 789 aa12.39□□□□□ -0.43
COL4A6-205ENST00000468338 SPTBN5Q9NRC6 3674 aaKnown RBP12.39□□□□□ -0.43
COL4A6-205ENST00000468338 UNC80Q8N2C7 3258 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 CFHP08603 1231 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 SRGAP2CP0DJJ0 459 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 CYP11B2P19099 503 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 SYT1P21579 422 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 GLRA2P23416 452 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 GPM6BQ13491 265 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 HYIQ5T013 277 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 MCPH1Q8NEM0 835 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 MRPL38Q96DV4 380 aaKnown RBP12.38□□□□□ -0.43
COL4A6-205ENST00000468338 CASD1Q96PB1 797 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 C11orf84Q9BUA3 381 aaPredicted RBP12.38□□□□□ -0.43
COL4A6-205ENST00000468338 TMEM117Q9H0C3 514 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 PRDM6Q9NQX0 595 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 A0A0C4DFX4 3053 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 NCOR1O75376 2440 aa12.38□□□□□ -0.43
COL4A6-205ENST00000468338 ATG2AQ2TAZ0 1938 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 PP2D1A8MPX8 630 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 FGFR1P11362 822 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 CTNNB1P35222 781 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 CCT6AP40227 531 aaKnown RBP12.37□□□□□ -0.43
COL4A6-205ENST00000468338 PHKA2P46019 1235 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 VAC14Q08AM6 782 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 CAPSQ13938 189 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 CAMK1Q14012 370 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 TFDP1Q14186 410 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
COL4A6-205ENST00000468338 KMT5BQ4FZB7 885 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 CLLU1OSQ5K130 101 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 CATSPER4Q7RTX7 472 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 SNX29Q8TEQ0 813 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 RSPH1Q8WYR4 309 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 LMAN2LQ9H0V9 348 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 CWH43Q9H720 699 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 FAM105AQ9NUU6 356 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 KIAA1024Q9UPX6 916 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 TTC28Q96AY4 2481 aa12.37□□□□□ -0.43
COL4A6-205ENST00000468338 TBKBP1A7MCY6 615 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 GRM6O15303 877 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 USO1O60763 962 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 EYA4O95677 639 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 BMP15O95972 392 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 SKIP12755 728 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 RFX1P22670 979 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 CDC25AP30304 524 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 AXLP30530 894 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 SOX11P35716 441 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 RAB27AP51159 221 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 MBTD1Q05BQ5 628 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 RESTQ13127 1097 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 COL19A1Q14993 1142 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 PTPROQ16827 1216 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 PAN2Q504Q3 1202 aaKnown RBP12.36□□□□□ -0.43
COL4A6-205ENST00000468338 UBXN11Q5T124 520 aa12.36□□□□□ -0.43
COL4A6-205ENST00000468338 KRT79Q5XKE5 535 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms