RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 FAM178BQ8IXR5 827 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 MYOCDQ8IZQ8 938 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 ENOX1Q8TC92 643 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 TMEM174Q8WUU8 243 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 PSPC1Q8WXF1 523 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 DHX38Q92620 1227 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 CCDC47Q96A33 483 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 PAWRQ96IZ0 340 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 ZNF668Q96K58 619 aaPredicted RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 EPAS1Q99814 870 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 DUSP9Q99956 384 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 BPIFA3Q9BQP9 254 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 FDXACB1Q9BRP7 624 aaPredicted RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 SEZ6LQ9BYH1 1024 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 NFKBIZQ9BYH8 718 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 HSD3B7Q9H2F3 369 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 MINDY3Q9H8M7 445 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 CBX8Q9HC52 389 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 KMT5AQ9NQR1 393 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 TRMT13Q9NUP7 481 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 EXOC1Q9NV70 894 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 DMAC2Q9NW81 257 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 ARHGAP28Q9P2N2 729 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 TSR3Q9UJK0 312 aaKnown RBP6.56□□□□□ -1.36
USP39-213ENST00000467885 TBX20Q9UMR3 447 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 TRAF3IP3Q9Y228 551 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 USP20Q9Y2K6 914 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 MCM3APO60318 1980 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 CASP8AP2Q9UKL3 1982 aa6.56□□□□□ -1.36
USP39-213ENST00000467885 ADGRA3Q8IWK6 1321 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 MYH15Q9Y2K3 1946 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 FSD2A1L4K1 749 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 DENND3A2RUS2 1198 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 KBTBD13C9JR72 458 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 PDXKO00764 312 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 LCE2BO14633 110 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 EIF3DO15371 548 aaKnown RBP eCLIP6.55□□□□□ -1.36
USP39-213ENST00000467885 B4GALT4O60513 344 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 TBCAO75347 108 aaKnown RBP6.55□□□□□ -1.36
USP39-213ENST00000467885 CSDE1O75534 798 aaKnown RBP6.55□□□□□ -1.36
USP39-213ENST00000467885 CAVIN2O95810 425 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 EDN1P05305 212 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 CCNE1P24864 410 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 ADSSP30520 456 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 HOXA11P31270 313 aaPredicted RBP6.55□□□□□ -1.36
USP39-213ENST00000467885 GPC3P51654 580 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 EFNA5P52803 228 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 CRYBB1P53674 252 aaPredicted RBP6.55□□□□□ -1.36
USP39-213ENST00000467885 STX17P56962 302 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 FAAP100Q0VG06 881 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 PTK7Q13308 1070 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 STX1AQ16623 288 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 AMHR2Q16671 573 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 ZCWPW2Q504Y3 356 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 COL13A1Q5TAT6 717 aaPredicted RBP6.55□□□□□ -1.36
USP39-213ENST00000467885 SPATA1Q5VX52 437 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 FOXR2Q6PJQ5 311 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 TRAF7Q6Q0C0 670 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 ANKRD33Q7Z3H0 272 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 ANKLE1Q8NAG6 615 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 RNF149Q8NC42 400 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 DIS3LQ8TF46 1054 aaKnown RBP6.55□□□□□ -1.36
USP39-213ENST00000467885 P2RX5Q93086 422 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 ZBTB45Q96K62 511 aaPredicted RBP6.55□□□□□ -1.36
USP39-213ENST00000467885 IFT74Q96LB3 600 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 TOX2Q96NM4 488 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 KIFC3Q9BVG8 833 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 CELF4Q9BZC1 486 aaKnown RBP6.55□□□□□ -1.36
USP39-213ENST00000467885 HAPLN2Q9GZV7 340 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 CCDC113Q9H0I3 377 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 TSPY26PQ9H489 355 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 PTPRHQ9HD43 1115 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 STARD7Q9NQZ5 370 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 FANCLQ9NW38 375 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 RWDD2AQ9UIY3 292 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 STYXL1Q9Y6J8 313 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 LRRC37A2A6NM11 1700 aa6.55□□□□□ -1.36
USP39-213ENST00000467885 RBBP6Q7Z6E9 1792 aaKnown RBP6.54□□□□□ -1.36
USP39-213ENST00000467885 A0A0U1RQG5 324 aaPredicted RBP6.54□□□□□ -1.36
USP39-213ENST00000467885 TISP43B9A030 160 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 ACKR2O00590 384 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 IKBKBO14920 756 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 AP5Z1O43299 807 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 GCNT3O95395 438 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 PIGRP01833 764 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 DARSP14868 501 aaKnown RBP6.54□□□□□ -1.36
USP39-213ENST00000467885 SCP2P22307 547 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 EIF4BP23588 611 aaKnown RBP6.54□□□□□ -1.36
USP39-213ENST00000467885 PPP1R2P41236 205 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 SNRPFP62306 86 aaKnown RBP6.54□□□□□ -1.36
USP39-213ENST00000467885 TLE2Q04725 743 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 MBTD1Q05BQ5 628 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 MGAT3Q09327 533 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 TMEM62Q0P6H9 643 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 DMP1Q13316 513 aaPredicted RBP6.54□□□□□ -1.36
USP39-213ENST00000467885 ALCAMQ13740 583 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 LAPTM4AQ15012 233 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 SNX17Q15036 470 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 PPP2R5AQ15172 486 aa6.54□□□□□ -1.36
USP39-213ENST00000467885 FAM187BQ17R55 369 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms