RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FAN1Q9Y2M0 1017 aa11.61□□□□□ -0.55
HDAC3-203ENST00000467533 MRPS17Q9Y2R5 130 aaKnown RBP11.61□□□□□ -0.55
HDAC3-203ENST00000467533 GCN1Q92616 2671 aaKnown RBP11.6□□□□□ -0.55
HDAC3-203ENST00000467533 MAGEB2O15479 319 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 CSDE1O75534 798 aaKnown RBP11.6□□□□□ -0.55
HDAC3-203ENST00000467533 OFD1O75665 1012 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 TDGF1P13385 188 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 ATP4AP20648 1035 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 PDE1AP54750 535 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 TROAPQ12815 778 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 CATIPQ7Z7H3 387 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 GLYCTKQ8IVS8 523 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 C12orf50Q8NA57 414 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-203ENST00000467533 TMEM175Q9BSA9 504 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 SENP2Q9HC62 589 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 NDRG2Q9UN36 371 aaKnown RBP11.6□□□□□ -0.55
HDAC3-203ENST00000467533 PIN4Q9Y237 131 aaKnown RBP11.6□□□□□ -0.55
HDAC3-203ENST00000467533 PRG3Q9Y2Y8 225 aaPredicted RBP11.6□□□□□ -0.55
HDAC3-203ENST00000467533 WDR81Q562E7 1941 aa11.6□□□□□ -0.55
HDAC3-203ENST00000467533 NRP1O14786 923 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 DDHD2O94830 711 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 ALDH2P05091 517 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 SDSP20132 328 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 RAB27AP51159 221 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 CCR3P51677 355 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 LIMK1P53667 647 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 ADCY1Q08828 1119 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 TRDNQ13061 729 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 CEP55Q53EZ4 464 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 LRSAM1Q6UWE0 723 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 CWC27Q6UX04 472 aaKnown RBP11.59□□□□□ -0.55
HDAC3-203ENST00000467533 GRASPQ7Z6J2 395 aaPredicted RBP11.59□□□□□ -0.55
HDAC3-203ENST00000467533 LINC01465Q8N7H1 131 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 KDF1Q8NAX2 398 aaPredicted RBP11.59□□□□□ -0.55
HDAC3-203ENST00000467533 CTCFLQ8NI51 663 aaPredicted RBP11.59□□□□□ -0.55
HDAC3-203ENST00000467533 PGBD4Q96DM1 585 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 PGBD1Q96JS3 809 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 DSCC1Q9BVC3 393 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 CHRDQ9H2X0 955 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 CHST12Q9NRB3 414 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 FAM105AQ9NUU6 356 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 TCEAL9Q9UHQ7 104 aa11.59□□□□□ -0.55
HDAC3-203ENST00000467533 CNOT1A5YKK6 2376 aaKnown RBP11.59□□□□□ -0.55
HDAC3-203ENST00000467533 TMEM8BA6NDV4 472 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 TGM5O43548 720 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 GAS2O43903 313 aaKnown RBP11.58□□□□□ -0.56
HDAC3-203ENST00000467533 KCNK5O95279 499 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 PAPLNO95428 1278 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 NCLP19338 710 aaKnown RBP11.58□□□□□ -0.56
HDAC3-203ENST00000467533 SFPQP23246 707 aaKnown RBP eCLIP11.58□□□□□ -0.56
HDAC3-203ENST00000467533 NTHL1P78549 312 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 RING1Q06587 406 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 SART3Q15020 963 aaKnown RBP11.58□□□□□ -0.56
HDAC3-203ENST00000467533 SF3A2Q15428 464 aaKnown RBP11.58□□□□□ -0.56
HDAC3-203ENST00000467533 ANKRD45Q5TZF3 282 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 TAS1R1Q7RTX1 841 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 FGF13Q92913 245 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 TRAIPQ9BWF2 469 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 GCOM2Q9BZD3 368 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-203ENST00000467533 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 RXFP1Q9HBX9 757 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 HEBP1Q9NRV9 189 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 DIAPH3Q9NSV4 1193 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 MARCH5Q9NX47 278 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 IGF2RP11717 2491 aa11.58□□□□□ -0.56
HDAC3-203ENST00000467533 DOCK6Q96HP0 2047 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 TDRD15B5MCY1 1934 aaKnown RBP11.57□□□□□ -0.56
HDAC3-203ENST00000467533 SRRM3A6NNA2 597 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-203ENST00000467533 ZMYND10O75800 440 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 POMCP01189 267 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 ZNF76P36508 570 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 OR1G1P47890 313 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 FOXC1Q12948 553 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 SRSF5Q13243 272 aaKnown RBP11.57□□□□□ -0.56
HDAC3-203ENST00000467533 FZD5Q13467 585 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 PSAPL1Q6NUJ1 521 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 CEP68Q76N32 757 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 MAP4K1Q92918 833 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 FAM167AQ96KS9 214 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 IER2Q9BTL4 223 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 RSAD1Q9HA92 442 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 POLIQ9UNA4 740 aa11.57□□□□□ -0.56
HDAC3-203ENST00000467533 MAFBQ9Y5Q3 323 aaPredicted RBP11.57□□□□□ -0.56
HDAC3-203ENST00000467533 CHURC1-FNTBB4DL54 471 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 TM4SF5O14894 197 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 PLEKHA8P1O95397 391 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 COL4A2P08572 1712 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 FNTBP49356 437 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 DSG1Q02413 1049 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 CCDC6Q16204 474 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 STPG1Q5TH74 334 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 LIN9Q5TKA1 542 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 AGMOQ6ZNB7 445 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 RALYLQ86SE5 291 aaKnown RBP11.56□□□□□ -0.56
HDAC3-203ENST00000467533 FAM160A2Q8N612 972 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-203ENST00000467533 ITFG1Q8TB96 612 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
HDAC3-203ENST00000467533 ANO3Q9BYT9 981 aa11.56□□□□□ -0.56
HDAC3-203ENST00000467533 ADAM33Q9BZ11 813 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms