RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 BHMT2Q9H2M3 363 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 LDAHQ9H6V9 325 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 CNTD2Q9H8S5 307 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 FAM204AQ9H8W3 233 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 DDX21Q9NR30 783 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS13A-209ENST00000467124 KCMF1Q9P0J7 381 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 FNIP2Q9P278 1114 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 NR2E3Q9Y5X4 410 aa5.19□□□□□ -1.58
VPS13A-209ENST00000467124 CARMIL2Q6F5E8 1435 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 MYOCOSA0A1B0GUC4 107 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 PRAMEF4O60810 478 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 SYN1P17600 705 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 CDR1P51861 262 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 EPHB3P54753 998 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 ITGA1P56199 1179 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 CD69Q07108 199 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 ADAM9Q13443 819 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 SEPT2Q15019 361 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 ANO4Q32M45 955 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 SWSAP1Q6NVH7 229 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 CHST15Q7LFX5 561 aaPredicted RBP5.18□□□□□ -1.58
VPS13A-209ENST00000467124 BMP8AQ7Z5Y6 402 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 SMC5Q8IY18 1101 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 SPICE1Q8N0Z3 855 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 Q8N3U1 123 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 SH2D3CQ8N5H7 860 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 LINC00482Q8N8I6 264 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 PAWRQ96IZ0 340 aaKnown RBP5.18□□□□□ -1.58
VPS13A-209ENST00000467124 STRBPQ96SI9 672 aaKnown RBP5.18□□□□□ -1.58
VPS13A-209ENST00000467124 TBCBQ99426 244 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 MCOLN1Q9GZU1 580 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 GREM2Q9H772 168 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 PTPRHQ9HD43 1115 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 PUF60Q9UHX1 559 aaKnown RBP5.18□□□□□ -1.58
VPS13A-209ENST00000467124 POLHQ9Y253 713 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 PTPN22Q9Y2R2 807 aa5.18□□□□□ -1.58
VPS13A-209ENST00000467124 LRRC10BA6NIK2 292 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 H3BML4 177 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 AKR1B10O60218 316 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 NRP2O60462 931 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 ZBED1O96006 694 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 FTLP02792 175 aaPredicted RBP5.17□□□□□ -1.58
VPS13A-209ENST00000467124 SLC5A1P13866 664 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 KCNQ1P51787 676 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 MAP2K6P52564 334 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 CAP1Q01518 475 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 DSC2Q02487 901 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 DGKDQ16760 1214 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 GRAMD4Q6IC98 578 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 TMEM132EQ6IEE7 984 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 XRRA1Q6P2D8 792 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 KLHDC10Q6PID8 442 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 ABHD15Q6UXT9 468 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 SRLQ86TD4 932 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 KYQ8NBH2 561 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 PLBD2Q8NHP8 589 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 HDAC10Q969S8 669 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 IL17RAQ96F46 866 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 ELAC2Q9BQ52 826 aaKnown RBP5.17□□□□□ -1.58
VPS13A-209ENST00000467124 PPCSQ9HAB8 311 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 RTEL1Q9NZ71 1219 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 PCDHB1Q9Y5F3 818 aa5.17□□□□□ -1.58
VPS13A-209ENST00000467124 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.17□□□□□ -1.58
VPS13A-209ENST00000467124 ANO9A1A5B4 782 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 TMEM127O75204 238 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 LY86O95711 162 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 GLDCP23378 1020 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 NRG3P56975 720 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 ACAP1Q15027 740 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 CNN3Q15417 329 aaKnown RBP5.16□□□□□ -1.58
VPS13A-209ENST00000467124 RNF220Q5VTB9 566 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 TRMT10BQ6PF06 316 aaKnown RBP5.16□□□□□ -1.58
VPS13A-209ENST00000467124 PRR23BQ6ZRT6 265 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 TSHZ1Q6ZSZ6 1077 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 MIGA2Q7L4E1 593 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 DAAM2Q86T65 1068 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 IGDCC3Q8IVU1 814 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 GLB1L2Q8IW92 636 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 BCL6BQ8N143 479 aaPredicted RBP5.16□□□□□ -1.58
VPS13A-209ENST00000467124 PIK3C3Q8NEB9 887 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 KLHDC4Q8TBB5 520 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 CCHCR1Q8TD31 782 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 RGMAQ96B86 450 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 ZBTB8AQ96BR9 441 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 C7orf25Q9BPX7 421 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 C11orf84Q9BUA3 381 aaPredicted RBP5.16□□□□□ -1.58
VPS13A-209ENST00000467124 HAPLN2Q9GZV7 340 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 ZNF700Q9H0M5 742 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 KCND1Q9NSA2 647 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 RBM12Q9NTZ6 932 aaKnown RBP5.16□□□□□ -1.58
VPS13A-209ENST00000467124 POLR3BQ9NW08 1133 aaPredicted RBP5.16□□□□□ -1.58
VPS13A-209ENST00000467124 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.16□□□□□ -1.58
VPS13A-209ENST00000467124 SAE1Q9UBE0 346 aaPredicted RBP5.16□□□□□ -1.58
VPS13A-209ENST00000467124 SCOCQ9UIL1 159 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 PCDHA3Q9Y5H8 950 aa5.16□□□□□ -1.58
VPS13A-209ENST00000467124 CFAP69A5D8W1 941 aa5.15□□□□□ -1.59
VPS13A-209ENST00000467124 FAM227AF5H4B4 570 aa5.15□□□□□ -1.59
VPS13A-209ENST00000467124 CUTAO60888 179 aa5.15□□□□□ -1.59
VPS13A-209ENST00000467124 EIF3JO75822 258 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms