RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 OXSMQ9NWU1 459 aa6.36□□□□□ -1.39
PRPF40A-205ENST00000467114 FSBPO95073 299 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 EYA4O95677 639 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 BPIP17213 487 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 DCAF17Q5H9S7 520 aaPredicted RBP6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 LAIR1Q6GTX8 287 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 CNNM4Q6P4Q7 775 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 APBB1IPQ7Z5R6 666 aaPredicted RBP6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 STRA8Q7Z7C7 330 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 ZNF276Q8N554 614 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 MB21D1Q8N884 522 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 PGBD4Q96DM1 585 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 ENKD1Q9H0I2 346 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 POFUT1Q9H488 388 aa6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.35□□□□□ -1.39
PRPF40A-205ENST00000467114 SHROOM4Q9ULL8 1493 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 ZNF891A8MT65 544 aaPredicted RBP6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 KPNA6O60684 536 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 STC2O76061 302 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 ATP2A2P16615 1042 aaKnown RBP6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 AHI1Q8N157 1196 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 RTF1Q92541 710 aaKnown RBP6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 NOL10Q9BSC4 688 aaKnown RBP6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 ZMAT4Q9H898 229 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 CAAP1Q9H8G2 361 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 TOMM22Q9NS69 142 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 NCDNQ9UBB6 729 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 FZD1Q9UP38 647 aa6.34□□□□□ -1.39
PRPF40A-205ENST00000467114 APOL3O95236 402 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 GAAP10253 952 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 GNAT2P19087 354 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 NR4A1P22736 598 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 KRTAP1-1Q07627 177 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 DHCR24Q15392 516 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 UNC5BQ8IZJ1 945 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 NXPE1Q8N323 547 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 SMC1BQ8NDV3 1235 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 HIST1H2AHQ96KK5 128 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 UIMC1Q96RL1 719 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 HIST1H2AJQ99878 128 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 SLKQ9H2G2 1235 aaPredicted RBP6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 ZKSCAN5Q9Y2L8 839 aa6.33□□□□□ -1.4
PRPF40A-205ENST00000467114 NRP1O14786 923 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 TGM5O43548 720 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 TGM1P22735 817 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 LRRC32Q14392 662 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 METTL24Q5JXM2 366 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 CRAMP1Q96RY5 1269 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 PDCD2LQ9BRP1 358 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 IFT57Q9NWB7 429 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 ING3Q9NXR8 418 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 H2AFY2Q9P0M6 372 aaPredicted RBP6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 PCSK5Q92824 1860 aa6.32□□□□□ -1.4
PRPF40A-205ENST00000467114 MYPNQ86TC9 1320 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 HOXA3O43365 443 aaPredicted RBP6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 PPFIA2O75334 1257 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 PPFIA4O75335 1185 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 CLSTN1O94985 981 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 ITGB1P05556 798 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 PROZP22891 400 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 CD40P25942 277 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 ADCYAP1R1P41586 468 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 NEK4P51957 841 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 AMPD3Q01432 767 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 SYNE4Q8N205 404 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 EFHBQ8N7U6 833 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 PIK3C3Q8NEB9 887 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 USP36Q9P275 1121 aaKnown RBP6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 HS3ST4Q9Y661 456 aa6.31□□□□□ -1.4
PRPF40A-205ENST00000467114 TRIM24O15164 1050 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 ALDH1A2O94788 518 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 GCP02774 474 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 ADRA1BP35368 520 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 CD69Q07108 199 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 FSTL1Q12841 308 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 MBNL2Q5VZF2 373 aaKnown RBP6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 UBR7Q8N806 425 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 CHTF18Q8WVB6 975 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 GPATCH3Q96I76 525 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 MLST8Q9BVC4 326 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 SPC25Q9HBM1 224 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 PCDHB6Q9Y5E3 794 aa6.3□□□□□ -1.4
PRPF40A-205ENST00000467114 GAS7O60861 476 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 DNAJC6O75061 913 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 RHOBTB3O94955 611 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 PCDH8O95206 1070 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 HK1P19367 917 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 FAM214AQ32MH5 1076 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 TAF7LQ5H9L4 462 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 LY6G5CQ5SRR4 150 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 LRRC55Q6ZSA7 311 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 CXorf67Q86X51 503 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 VRK3Q8IV63 474 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 CDYL2Q8N8U2 506 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 OR52N2Q8NGI0 321 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 CHAC2Q8WUX2 184 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 LEO1Q8WVC0 666 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms