RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 GAS2O43903 313 aaKnown RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 ZIC2O95409 532 aaPredicted RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 F13A1P00488 732 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 LGALS2P05162 132 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 P4HBP07237 508 aaKnown RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 SDHBP21912 280 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 DNAJB1P25685 340 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 RFC5P40937 340 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 NDUFV1P49821 464 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 STAT5BP51692 787 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 ATP2C1P98194 919 aaPredicted RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 SEMA3FQ13275 785 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 ITGB3BPQ13352 177 aaPredicted RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 TRIM71Q2Q1W2 868 aaKnown RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 HSDL1Q3SXM5 330 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 TAF2Q6P1X5 1199 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 ABHD15Q6UXT9 468 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 OTUD6AQ7L8S5 288 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 MIER3Q7Z3K6 550 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 RSPH3Q86UC2 560 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 ATP8B4Q8TF62 1192 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 CCDC43Q96MW1 224 aaKnown RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 SCAND2PQ9GZW5 306 aaPredicted RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 NT5C3AQ9H0P0 336 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 S1PR5Q9H228 398 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 TTC12Q9H892 705 aaPredicted RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 TUFT1Q9NNX1 390 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 ZNF302Q9NR11 478 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 NRBP2Q9NSY0 501 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 BARX2Q9UMQ3 279 aaPredicted RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 SORCS3Q9UPU3 1222 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 MTMR6Q9Y217 621 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 NOD1Q9Y239 953 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 MAFBQ9Y5Q3 323 aaPredicted RBP7.74□□□□□ -1.17
CLDN4-204ENST00000466411 IGSF9BQ9UPX0 1349 aa7.74□□□□□ -1.17
CLDN4-204ENST00000466411 ARID2Q68CP9 1835 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 BPTFQ12830 3046 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.73□□□□□ -1.17
CLDN4-204ENST00000466411 HAS3O00219 553 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 SLC37A4O43826 429 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 HBP1O60381 514 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 ATP9AO75110 1047 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 YEATS4O95619 227 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 XRCC6P12956 609 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLDN4-204ENST00000466411 LONP1P36776 959 aaKnown RBP7.73□□□□□ -1.17
CLDN4-204ENST00000466411 QARSP47897 775 aaKnown RBP7.73□□□□□ -1.17
CLDN4-204ENST00000466411 PSMC5P62195 406 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 KRT85P78386 507 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 RESTQ13127 1097 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 EPHA7Q15375 998 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 PTGISQ16647 500 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 KIAA0753Q2KHM9 967 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 XKR3Q5GH77 459 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 FAM47CQ5HY64 1035 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 ZNF484Q5JVG2 852 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 KRT79Q5XKE5 535 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 GDF6Q6KF10 455 aaPredicted RBP7.73□□□□□ -1.17
CLDN4-204ENST00000466411 PDXDC2PQ6P474 469 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 B3GNT9Q6UX72 402 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 DBF4BQ8NFT6 615 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 VN1R2Q8NFZ6 395 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 CLP1Q92989 425 aaKnown RBP7.73□□□□□ -1.17
CLDN4-204ENST00000466411 WNT8BQ93098 351 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 CCDC34Q96HJ3 373 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 MTMR9Q96QG7 549 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 RTKNQ9BST9 563 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 ZSWIM4Q9H7M6 989 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 RC3H2Q9HBD1 1191 aaKnown RBP7.73□□□□□ -1.17
CLDN4-204ENST00000466411 KCNG1Q9UIX4 513 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 VAV3Q9UKW4 847 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 PCDHGC3Q9UN70 934 aa7.73□□□□□ -1.17
CLDN4-204ENST00000466411 NBEAQ8NFP9 2946 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 GSTTP1A0A1W2PQM5 241 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 C17orf102A2RUQ5 167 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 MAGEB2O15479 319 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 LILRB3O75022 631 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 PPP6R2O75170 966 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 LYPLA2O95372 231 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 ATP2B1P20020 1258 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 SCP2P22307 547 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 RPA1P27694 616 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 TMOD1P28289 359 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 TXKP42681 527 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 NASPP49321 788 aaPredicted RBP7.72□□□□□ -1.17
CLDN4-204ENST00000466411 DNM2P50570 870 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 SHC2P98077 582 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 RBM10P98175 930 aaKnown RBP7.72□□□□□ -1.17
CLDN4-204ENST00000466411 PPFIA1Q13136 1202 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 MTMR3Q13615 1198 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 KCNC3Q14003 757 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 SF3A1Q15459 793 aaKnown RBP7.72□□□□□ -1.17
CLDN4-204ENST00000466411 EARS2Q5JPH6 523 aaKnown RBP7.72□□□□□ -1.17
CLDN4-204ENST00000466411 ODR4Q5SWX8 454 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 FERMT3Q86UX7 667 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 C4orf19Q8IY42 314 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 CKAP2LQ8IYA6 745 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 MYOCDQ8IZQ8 938 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 IGSF22Q8N9C0 903 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 ANKK1Q8NFD2 765 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms