RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 SOX5P35711 763 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 STAT5BP51692 787 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 NEDD9Q14511 834 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 RABGGTAQ92696 567 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 COPS5Q92905 334 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 ELMO3Q96BJ8 720 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 FAM84AQ96KN4 292 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 MMS19Q96T76 1030 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 TMEM117Q9H0C3 514 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 ZNF446Q9NWS9 450 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 ARHGAP28Q9P2N2 729 aa14.73□□□□□ -0.05
UBE4B-206ENST00000466379 DNAJC25-GNG10A0A024R161 153 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 CTAGE15A4D2H0 777 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 SPDYE4A6NLX3 237 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 CTAGE8P0CG41 777 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 FERP16591 822 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 GLRA2P23416 452 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 SNRPFP62306 86 aaKnown RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 MAP2K1Q02750 393 aaPredicted RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 METTL7BQ6UX53 244 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 CTAGE6Q86UF2 777 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 CTAGE4Q8IX94 777 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 NOA1Q8NC60 698 aaKnown RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 ALS2CR12Q96Q35 445 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 CEP89Q96ST8 783 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 DHX33Q9H6R0 707 aaKnown RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 DDX41Q9UJV9 622 aaKnown RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 JRKLQ9Y4A0 524 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 BZW2Q9Y6E2 419 aaKnown RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 ANO9A1A5B4 782 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 LRRIQ4A6NIV6 560 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 DDX3XO00571 662 aaKnown RBP eCLIP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 RHOXF2BP0C7M4 288 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 MXI1P50539 228 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 RTP1P59025 263 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 DRP2Q13474 957 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 HSDL1Q3SXM5 330 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 EPC2Q52LR7 807 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 NFRKBQ6P4R8 1299 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 GPR161Q8N6U8 529 aaKnown RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 LNX1Q8TBB1 728 aaPredicted RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 SEPT1Q8WYJ6 367 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 KAT5Q92993 513 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 NOX5Q96PH1 765 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 RHOXF2Q9BQY4 288 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 NIFKQ9BYG3 293 aaKnown RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 PARD6BQ9BYG5 372 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 UBE2TQ9NPD8 197 aaPredicted RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 LUC7LQ9NQ29 371 aaKnown RBP14.72□□□□□ -0.05
UBE4B-206ENST00000466379 PDGFCQ9NRA1 345 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 NAGPAQ9UK23 515 aa14.72□□□□□ -0.05
UBE4B-206ENST00000466379 ZNFX1Q9P2E3 1918 aaKnown RBP14.71□□□□□ -0.05
UBE4B-206ENST00000466379 LRRIQ3A6PVS8 624 aaPredicted RBP14.71□□□□□ -0.05
UBE4B-206ENST00000466379 FOXN3O00409 490 aaPredicted RBP14.71□□□□□ -0.05
UBE4B-206ENST00000466379 CXCR5P32302 372 aa14.71□□□□□ -0.05
UBE4B-206ENST00000466379 NAB2Q15742 525 aa14.71□□□□□ -0.05
UBE4B-206ENST00000466379 FAM160B1Q5W0V3 765 aa14.71□□□□□ -0.05
UBE4B-206ENST00000466379 ALKBH5Q6P6C2 394 aaKnown RBP14.71□□□□□ -0.05
UBE4B-206ENST00000466379 PNMA8AQ86V59 439 aaPredicted RBP14.71□□□□□ -0.05
UBE4B-206ENST00000466379 OLIG1Q8TAK6 271 aa14.71□□□□□ -0.05
UBE4B-206ENST00000466379 SLC7A3Q8WY07 619 aa14.71□□□□□ -0.05
UBE4B-206ENST00000466379 FAM213AQ9BRX8 229 aa14.71□□□□□ -0.05
UBE4B-206ENST00000466379 CCDC94Q9BW85 323 aaPredicted RBP14.71□□□□□ -0.05
UBE4B-206ENST00000466379 ANKZF1Q9H8Y5 726 aa14.71□□□□□ -0.05
UBE4B-206ENST00000466379 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
UBE4B-206ENST00000466379 SNX12Q9UMY4 172 aa14.71□□□□□ -0.05
UBE4B-206ENST00000466379 PDE2AO00408 941 aaPredicted RBP14.71□□□□□ -0.06
UBE4B-206ENST00000466379 MAPK13O15264 365 aa14.71□□□□□ -0.06
UBE4B-206ENST00000466379 PALMO75781 387 aa14.71□□□□□ -0.06
UBE4B-206ENST00000466379 SEC31AO94979 1220 aaKnown RBP14.71□□□□□ -0.06
UBE4B-206ENST00000466379 TGFB3P10600 412 aa14.71□□□□□ -0.06
UBE4B-206ENST00000466379 TXLNBQ8N3L3 684 aa14.71□□□□□ -0.06
UBE4B-206ENST00000466379 CAGE1Q8TC20 777 aa14.71□□□□□ -0.06
UBE4B-206ENST00000466379 COG1Q8WTW3 980 aa14.71□□□□□ -0.06
UBE4B-206ENST00000466379 U2AF1L4Q8WU68 220 aaKnown RBP14.71□□□□□ -0.06
UBE4B-206ENST00000466379 SEMA4DQ92854 862 aa14.71□□□□□ -0.06
UBE4B-206ENST00000466379 MROH8Q9H579 483 aa14.71□□□□□ -0.06
UBE4B-206ENST00000466379 TMCO5BA8MYB1 307 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 PDHXO00330 501 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 N4BP1O75113 896 aaKnown RBP14.7□□□□□ -0.06
UBE4B-206ENST00000466379 EDN1P05305 212 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 DLATP10515 647 aaKnown RBP14.7□□□□□ -0.06
UBE4B-206ENST00000466379 COPB2P35606 906 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 ARL2P36404 184 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 LIG4P49917 911 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 DNA2P51530 1060 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 CETN1Q12798 172 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 TARBP2Q15633 366 aaKnown RBP14.7□□□□□ -0.06
UBE4B-206ENST00000466379 GLYCTKQ8IVS8 523 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 GPD1LQ8N335 351 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 DEPTORQ8TB45 409 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 PARD3BQ8TEW8 1205 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 GLG1Q92896 1179 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 GPR20Q99678 358 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 NRBP2Q9NSY0 501 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 NENFQ9UMX5 172 aa14.7□□□□□ -0.06
UBE4B-206ENST00000466379 NOP56O00567 594 aaKnown RBP14.69□□□□□ -0.06
UBE4B-206ENST00000466379 FTCDO95954 541 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 CYP24A1Q07973 514 aa14.69□□□□□ -0.06
UBE4B-206ENST00000466379 BRDTQ58F21 947 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms