RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 METRNQ9UJH8 293 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 USP20Q9Y2K6 914 aa10.78□□□□□ -0.68
RTFDC1-205ENST00000466260 EYSQ5T1H1 3165 aa10.77□□□□□ -0.68
RTFDC1-205ENST00000466260 SFI1A8K8P3 1242 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 C7P10643 843 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 CYP11B2P19099 503 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 PBX3P40426 434 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 STK38Q15208 465 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 PTPAQ15257 358 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 CLLU1OSQ5K130 101 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 IFT74Q96LB3 600 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 CLIC6Q96NY7 704 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 EIF2AQ9BY44 585 aaKnown RBP10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 TRIM6Q9C030 488 aaPredicted RBP10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 TMEM117Q9H0C3 514 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 NT5C3AQ9H0P0 336 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 GBP3Q9H0R5 595 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 CSRNP2Q9H175 543 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 ELAC1Q9H777 363 aaKnown RBP10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 CHST12Q9NRB3 414 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 RNF19AQ9NV58 838 aa10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 TYW1Q9NV66 732 aaKnown RBP10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.69
RTFDC1-205ENST00000466260 COL6A3P12111 3177 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 CITO14578 2027 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 NPHP3-ACAD11A0A0J9YXS1 232 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 A0A0U1RQF3 1178 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 CCDC169A6NNP5 214 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 NT5C1B-RDH14C9J2C7 533 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 H3BNC9 293 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 GRM6O15303 877 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 HOXA2O43364 376 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 HIP1RO75146 1068 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 NPTXRO95502 500 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 F13A1P00488 732 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 PRKCBP05771 671 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 LINC00271P0C7V0 271 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 PLA2G4BP0C869 781 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 ZSCAN22P10073 491 aaPredicted RBP10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 ARF4P18085 180 aaPredicted RBP10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 PLCG1P19174 1290 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 LONP1P36776 959 aaKnown RBP10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 BMPR1AP36894 532 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 NAMPTP43490 491 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 RAB27AP51159 221 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 PEX3P56589 373 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 NCBP1Q09161 790 aaKnown RBP10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 TMEM119Q4V9L6 283 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 RINT1Q6NUQ1 792 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 EP400NLQ6ZTU2 488 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 USP49Q70CQ1 688 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 THNSL1Q8IYQ7 743 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 LRRC43Q8N309 656 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 KLHL23Q8NBE8 558 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 EPSTI1Q96J88 318 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 AK8Q96MA6 479 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 C11orf84Q9BUA3 381 aaPredicted RBP10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 RWDD3Q9Y3V2 267 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 HES2Q9Y543 173 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
RTFDC1-205ENST00000466260 ZC3H11AO75152 810 aaKnown RBP eCLIP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 EDN1P05305 212 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 KRT18P05783 430 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 HOXA11P31270 313 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 CA8P35219 290 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 FAM189BP81408 668 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 RNASELQ05823 741 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 MCM6Q14566 821 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 PPP2R5AQ15172 486 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 AMHR2Q16671 573 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 PTPROQ16827 1216 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 HYIQ5T013 277 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 UBXN11Q5T124 520 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 L1TD1Q5T7N2 865 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 NOTUMQ6P988 496 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 ZNF598Q86UK7 904 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 GPBP1Q86WP2 473 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 COLGALT1Q8NBJ5 622 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 LRRC15Q8TF66 581 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 KIFAP3Q92845 792 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 CLP1Q92989 425 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 PGBD4Q96DM1 585 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 ZNF396Q96N95 335 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 CASD1Q96PB1 797 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 C2orf40Q9H1Z8 148 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 NXF3Q9H4D5 531 aaKnown RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 ZHX3Q9H4I2 956 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 CWH43Q9H720 699 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 RSAD1Q9HA92 442 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 AAASQ9NRG9 546 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 FBXO2Q9UK22 296 aaPredicted RBP10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 IPPQ9Y573 584 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 PCDHB12Q9Y5F1 795 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 CHD7Q9P2D1 2997 aa10.75□□□□□ -0.69
RTFDC1-205ENST00000466260 CHD9Q3L8U1 2897 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms