RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 USP7Q93009 1102 aa8.1□□□□□ -1.11
SPTA1-203ENST00000465741 KIF1BPQ96EK5 621 aa8.1□□□□□ -1.11
SPTA1-203ENST00000465741 KIRREL1Q96J84 757 aa8.1□□□□□ -1.11
SPTA1-203ENST00000465741 PDGFDQ9GZP0 370 aaPredicted RBP8.1□□□□□ -1.11
SPTA1-203ENST00000465741 SPON1Q9HCB6 807 aa8.1□□□□□ -1.11
SPTA1-203ENST00000465741 SLC6A20Q9NP91 592 aa8.1□□□□□ -1.11
SPTA1-203ENST00000465741 LRP5O75197 1615 aa8.1□□□□□ -1.11
SPTA1-203ENST00000465741 BTAF1O14981 1849 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 BRINP1O60477 761 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 SASH1O94885 1247 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 TFCP2Q12800 502 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 KIR3DS1Q14943 382 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 SEPT7Q16181 437 aaKnown RBP8.09□□□□□ -1.11
SPTA1-203ENST00000465741 PRR5LQ6MZQ0 368 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 LDHAL6AQ6ZMR3 332 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 ATG9AQ7Z3C6 839 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 ATG4DQ86TL0 474 aaPredicted RBP8.09□□□□□ -1.11
SPTA1-203ENST00000465741 ATL2Q8NHH9 583 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.09□□□□□ -1.11
SPTA1-203ENST00000465741 SEC14L1Q92503 715 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 SHISA4Q96DD7 197 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 TNFRSF12AQ9NP84 129 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 B4GALT6Q9UBX8 382 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 CBLCQ9ULV8 474 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 TJP1Q07157 1748 aa8.09□□□□□ -1.11
SPTA1-203ENST00000465741 RREB1Q92766 1687 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 BIN1O00499 593 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 CIAO1O76071 339 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 F2P00734 622 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 CYBBP04839 570 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 IFIT2P09913 472 aaKnown RBP8.08□□□□□ -1.12
SPTA1-203ENST00000465741 PDE6AP16499 860 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 IL15P40933 162 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-203ENST00000465741 OCRLQ01968 901 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 STRN3Q13033 797 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 EMC4Q5J8M3 183 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 HABP4Q5JVS0 413 aaKnown RBP8.08□□□□□ -1.12
SPTA1-203ENST00000465741 STEAP3Q658P3 488 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 PAQR3Q6TCH7 311 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 AACSQ86V21 672 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 NLGN4XQ8N0W4 816 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 CLASRPQ8N2M8 674 aaKnown RBP8.08□□□□□ -1.12
SPTA1-203ENST00000465741 PIP4K2CQ8TBX8 421 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 PHOSPHO1Q8TCT1 267 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 EAF2Q96CJ1 260 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-203ENST00000465741 PEX11GQ96HA9 241 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 MPHOSPH8Q99549 860 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 TTC1Q99614 292 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 RNF32Q9H0A6 362 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 CCDC8Q9H0W5 538 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-203ENST00000465741 SLC6A17Q9H1V8 727 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 CNNM1Q9NRU3 951 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 FBLN5Q9UBX5 448 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 YBX2Q9Y2T7 364 aaKnown RBP8.08□□□□□ -1.12
SPTA1-203ENST00000465741 RIPOR2Q9Y4F9 1068 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 NUP188Q5SRE5 1749 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 CARMIL3Q8ND23 1372 aa8.08□□□□□ -1.12
SPTA1-203ENST00000465741 SLC12A8A0AV02 714 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 ZNF561-AS1K7EIQ3 104 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 TRAF5O00463 557 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 HGSO14964 777 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-203ENST00000465741 ZEB2O60315 1214 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 MPOP05164 745 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 KRT15P19012 456 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 IGHMBP2P38935 993 aaKnown RBP8.07□□□□□ -1.12
SPTA1-203ENST00000465741 MECP2P51608 486 aaKnown RBP8.07□□□□□ -1.12
SPTA1-203ENST00000465741 ERVFRD-1P60508 538 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 TIMM10P62072 90 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 RPS8P62241 208 aaKnown RBP8.07□□□□□ -1.12
SPTA1-203ENST00000465741 TMEM62Q0P6H9 643 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 NR1I3Q14994 352 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 METTL24Q5JXM2 366 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 TSHZ3Q63HK5 1081 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 ARHGAP36Q6ZRI8 547 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 UHMK1Q8TAS1 419 aaKnown RBP8.07□□□□□ -1.12
SPTA1-203ENST00000465741 CDC5LQ99459 802 aaKnown RBP8.07□□□□□ -1.12
SPTA1-203ENST00000465741 BOCQ9BWV1 1114 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 IFT22Q9H7X7 185 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 DBR1Q9UK59 544 aaKnown RBP8.07□□□□□ -1.12
SPTA1-203ENST00000465741 DSEQ9UL01 958 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 ABCC12Q96J65 1359 aa8.07□□□□□ -1.12
SPTA1-203ENST00000465741 PTPDC1A2A3K4 754 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 ZBTB7AO95365 584 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 EFEMP2O95967 443 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 DBHP09172 617 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 COL6A2P12110 1019 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 CDK11BP21127 795 aaKnown RBP8.06□□□□□ -1.12
SPTA1-203ENST00000465741 PDE1AP54750 535 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 IL2P60568 153 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 FIGNQ5HY92 759 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 HHIPL2Q6UWX4 724 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 OTOP1Q7RTM1 612 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 OSTM1Q86WC4 334 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 DDX42Q86XP3 938 aaKnown RBP eCLIP8.06□□□□□ -1.12
SPTA1-203ENST00000465741 ANKRD18AQ8IVF6 992 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 CELF1Q92879 486 aaKnown RBP8.06□□□□□ -1.12
SPTA1-203ENST00000465741 INTS4Q96HW7 963 aaKnown RBP8.06□□□□□ -1.12
SPTA1-203ENST00000465741 NEUROD6Q96NK8 337 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 BRIP1Q9BX63 1249 aa8.06□□□□□ -1.12
SPTA1-203ENST00000465741 SMOC1Q9H4F8 434 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms