RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 FOXK2Q01167 660 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 AKAP17AQ02040 695 aaKnown RBP11.57□□□□□ -0.56
GPNMB-206ENST00000465673 KRT32Q14532 448 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 Q4G0T1 1027 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 BMP2KLQ5H9B9 411 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 ZNF410Q86VK4 478 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 PPFIBP1Q86W92 1011 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 BICD2Q8TD16 824 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 RIN2Q8WYP3 895 aaPredicted RBP11.57□□□□□ -0.56
GPNMB-206ENST00000465673 B3GALT6Q96L58 329 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 MYADMQ96S97 322 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
GPNMB-206ENST00000465673 EMILIN2Q9BXX0 1053 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 MAN1C1Q9NR34 630 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 MRPL17Q9NRX2 175 aaKnown RBP11.57□□□□□ -0.56
GPNMB-206ENST00000465673 AGPAT5Q9NUQ2 364 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 MARCH5Q9NX47 278 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 MIOSQ9NXC5 875 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 WRAP73Q9P2S5 460 aaPredicted RBP11.57□□□□□ -0.56
GPNMB-206ENST00000465673 CA14Q9ULX7 337 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 FAN1Q9Y2M0 1017 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 SNX14Q9Y5W7 946 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 R4GN57 208 aa11.57□□□□□ -0.56
GPNMB-206ENST00000465673 TEX28O15482 410 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 SLC37A4O43826 429 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 SKIP12755 728 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 HOXA11P31270 313 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 GBP2P32456 591 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 CDC42EP1Q00587 391 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 MRPL10Q7Z7H8 261 aaKnown RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 PIAS4Q8N2W9 510 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 SMG8Q8ND04 991 aaKnown RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 CCDC148Q8NFR7 591 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 ETNPPLQ8TBG4 499 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 URGCPQ8TCY9 931 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 KCNG4Q8TDN1 519 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 PRPF31Q8WWY3 499 aaKnown RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 PGBD4Q96DM1 585 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 AIFM3Q96NN9 605 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 FAM193BQ96PV7 902 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 RNF26Q9BY78 433 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 INO80BQ9C086 356 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-206ENST00000465673 RSAD1Q9HA92 442 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 HES2Q9Y543 173 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 COL4A3BPQ9Y5P4 624 aa11.56□□□□□ -0.56
GPNMB-206ENST00000465673 NID2Q14112 1375 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 CYP3A7-CYP3A51PA0A087WV96 503 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 ZBTB39O15060 712 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 INPPL1O15357 1258 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 DCNP07585 359 aaKnown RBP11.55□□□□□ -0.56
GPNMB-206ENST00000465673 IFNAR1P17181 557 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 RPS6KB1P23443 525 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 CYP3A7P24462 503 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 PDIA3P30101 505 aaKnown RBP11.55□□□□□ -0.56
GPNMB-206ENST00000465673 OR1G1P47890 313 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 RAB27AP51159 221 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 PSMC5P62195 406 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 NPY5RQ15761 445 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 SPECC1Q5M775 1068 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 BLOC1S2Q6QNY1 142 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 C15orf39Q6ZRI6 1047 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 PALB2Q86YC2 1186 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 GLYCTKQ8IVS8 523 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 SLC44A3Q8N4M1 653 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 RDM1Q8NG50 284 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 RABGGTAQ92696 567 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 KCNB2Q92953 911 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 RPS6KC1Q96S38 1066 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 GAD1Q99259 594 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 RTP3Q9BQQ7 232 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 EIF2AQ9BY44 585 aaKnown RBP11.55□□□□□ -0.56
GPNMB-206ENST00000465673 WDR6Q9NNW5 1121 aaKnown RBP11.55□□□□□ -0.56
GPNMB-206ENST00000465673 IGSF9Q9P2J2 1179 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 PCDHA4Q9UN74 947 aa11.55□□□□□ -0.56
GPNMB-206ENST00000465673 M0R2N6 131 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 SOD2P04179 222 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 URODP06132 367 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 LAMTOR4Q0VGL1 99 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 INF2Q27J81 1249 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 KIAA0319Q5VV43 1072 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 COLGALT2Q8IYK4 626 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 BLIDQ8IZY5 108 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 GPR152Q8TDT2 470 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 SMG7Q92540 1137 aaKnown RBP11.54□□□□□ -0.56
GPNMB-206ENST00000465673 ZNF707Q96C28 371 aaPredicted RBP11.54□□□□□ -0.56
GPNMB-206ENST00000465673 RMDN1Q96DB5 314 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 CPB2Q96IY4 423 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 CEP170P1Q96L14 293 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 ZFP42Q96MM3 310 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 MBOAT7Q96N66 472 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 TMEM175Q9BSA9 504 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 RPP25Q9BUL9 199 aaKnown RBP11.54□□□□□ -0.56
GPNMB-206ENST00000465673 HERC2P3Q9BVR0 1158 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 APOL6Q9BWW8 343 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 TBC1D17Q9HA65 648 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 CACNG4Q9UBN1 327 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 WNT16Q9UBV4 365 aa11.54□□□□□ -0.56
GPNMB-206ENST00000465673 DDX25Q9UHL0 483 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms