RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 FAM214AQ32MH5 1076 aa7.46□□□□□ -1.22
SMC4-205ENST00000465563 LRRTM3Q86VH5 581 aa7.46□□□□□ -1.22
SMC4-205ENST00000465563 HOMER1Q86YM7 354 aa7.46□□□□□ -1.22
SMC4-205ENST00000465563 OR5M3Q8NGP4 307 aa7.46□□□□□ -1.22
SMC4-205ENST00000465563 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
SMC4-205ENST00000465563 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
SMC4-205ENST00000465563 FZD1Q9UP38 647 aa7.46□□□□□ -1.22
SMC4-205ENST00000465563 TGM5O43548 720 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 PPFIA4O75335 1185 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 LY86O95711 162 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 ITGB1P05556 798 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 METTL24Q5JXM2 366 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 LY6G5CQ5SRR4 150 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 GPR158Q5T848 1215 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 CPT1CQ8TCG5 803 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 RNPC3Q96LT9 517 aaKnown RBP7.45□□□□□ -1.22
SMC4-205ENST00000465563 FAM193BQ96PV7 902 aaPredicted RBP7.45□□□□□ -1.22
SMC4-205ENST00000465563 CRAMP1Q96RY5 1269 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 PDCD2LQ9BRP1 358 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMC4-205ENST00000465563 USP18Q9UMW8 372 aa7.45□□□□□ -1.22
SMC4-205ENST00000465563 FAM83GA6ND36 823 aa7.44□□□□□ -1.22
SMC4-205ENST00000465563 PFKMP08237 780 aa7.44□□□□□ -1.22
SMC4-205ENST00000465563 XPAP23025 273 aaPredicted RBP7.44□□□□□ -1.22
SMC4-205ENST00000465563 CASRP41180 1078 aa7.44□□□□□ -1.22
SMC4-205ENST00000465563 PTPAQ15257 358 aa7.44□□□□□ -1.22
SMC4-205ENST00000465563 CNNM4Q6P4Q7 775 aa7.44□□□□□ -1.22
SMC4-205ENST00000465563 FAM83AQ86UY5 434 aa7.44□□□□□ -1.22
SMC4-205ENST00000465563 GLB1L3Q8NCI6 653 aaPredicted RBP7.44□□□□□ -1.22
SMC4-205ENST00000465563 PROKR1Q8TCW9 393 aa7.44□□□□□ -1.22
SMC4-205ENST00000465563 TRIM24O15164 1050 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 NRP2O60462 931 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 DNAJC6O75061 913 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 SEC24DO94855 1032 aaPredicted RBP7.43□□□□□ -1.22
SMC4-205ENST00000465563 SCAF4O95104 1147 aaKnown RBP7.43□□□□□ -1.22
SMC4-205ENST00000465563 ABHD16AO95870 558 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 GCP02774 474 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 NR4A1P22736 598 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 GPR15P49685 360 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 WNT3AP56704 352 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 OCRLQ01968 901 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 SART3Q15020 963 aaKnown RBP7.43□□□□□ -1.22
SMC4-205ENST00000465563 ZBTB41Q5SVQ8 909 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 MBNL2Q5VZF2 373 aaKnown RBP7.43□□□□□ -1.22
SMC4-205ENST00000465563 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 TAS1R1Q7RTX1 841 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 GAB3Q8WWW8 586 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 UBXN4Q92575 508 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 NINJ1Q92982 152 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 IL17RAQ96F46 866 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 DRC1Q96MC2 740 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 MLST8Q9BVC4 326 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 HDAC5Q9UQL6 1122 aa7.43□□□□□ -1.22
SMC4-205ENST00000465563 RHOBTB3O94955 611 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 CFBP00751 764 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 GYPEP15421 78 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 LSP1P33241 339 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 SCNN1BP51168 640 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 NRG3P56975 720 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 PHC1P78364 1004 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 COL10A1Q03692 680 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 MRPL49Q13405 166 aaKnown RBP7.42□□□□□ -1.22
SMC4-205ENST00000465563 CCDC178Q5BJE1 867 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 KCNV1Q6PIU1 500 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 LRRC55Q6ZSA7 311 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 VRK3Q8IV63 474 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 ZNF610Q8N9Z0 462 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 SMC1BQ8NDV3 1235 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 OR52N2Q8NGI0 321 aa7.42□□□□□ -1.22
SMC4-205ENST00000465563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMC4-205ENST00000465563 EIF2B4Q9UI10 523 aaKnown RBP7.42□□□□□ -1.22
SMC4-205ENST00000465563 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMC4-205ENST00000465563 DUSP2Q05923 314 aa7.41□□□□□ -1.22
SMC4-205ENST00000465563 PCBP1Q15365 356 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMC4-205ENST00000465563 VPS72Q15906 364 aa7.41□□□□□ -1.22
SMC4-205ENST00000465563 IQSEC1Q6DN90 963 aa7.41□□□□□ -1.22
SMC4-205ENST00000465563 LMBR1LQ6UX01 489 aa7.41□□□□□ -1.22
SMC4-205ENST00000465563 CXorf67Q86X51 503 aaPredicted RBP7.41□□□□□ -1.22
SMC4-205ENST00000465563 PPM1KQ8N3J5 372 aa7.41□□□□□ -1.22
SMC4-205ENST00000465563 APPBP2Q92624 585 aa7.41□□□□□ -1.22
SMC4-205ENST00000465563 GPR101Q96P66 508 aaPredicted RBP7.41□□□□□ -1.22
SMC4-205ENST00000465563 FDXACB1Q9BRP7 624 aaPredicted RBP7.41□□□□□ -1.22
SMC4-205ENST00000465563 CPEB1Q9BZB8 566 aaKnown RBP7.41□□□□□ -1.22
SMC4-205ENST00000465563 KCNH6Q9H252 994 aa7.41□□□□□ -1.22
SMC4-205ENST00000465563 PIF1Q9H611 641 aa7.41□□□□□ -1.22
SMC4-205ENST00000465563 PRSS38A1L453 326 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 BMP5P22003 454 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 GZMKP49863 264 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 MGAT5Q09328 741 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 TKFCQ3LXA3 575 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 TIGD2Q4W5G0 525 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 PLEKHG4Q58EX7 1191 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 DOK3Q7L591 496 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 NIM1KQ8IY84 436 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 AHI1Q8N157 1196 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 NDC1Q9BTX1 674 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 FANCLQ9NW38 375 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 HS3ST4Q9Y661 456 aa7.4□□□□□ -1.22
SMC4-205ENST00000465563 NUMBLQ9Y6R0 609 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms