RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 CARNS1A5YM72 827 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 WNT7AO00755 349 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 B4GALT3O60512 393 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 DDHD2O94830 711 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 CTSAP10619 480 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 SLC11A1P49279 550 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 BMP8AQ7Z5Y6 402 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 DIS3L2Q8IYB7 885 aaKnown RBP23.26■■□□□ 1.31
CSPG5-204ENST00000465441 TTC12Q9H892 705 aaPredicted RBP23.26■■□□□ 1.31
CSPG5-204ENST00000465441 RSAD1Q9HA92 442 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 CDH22Q9UJ99 828 aa23.26■■□□□ 1.31
CSPG5-204ENST00000465441 LYPLA2O95372 231 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 ALDH2P05091 517 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 TXKP42681 527 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 TPRNQ4KMQ1 711 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 ERICH6BQ5W0A0 696 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 URGCPQ8TCY9 931 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 ADAM7Q9H2U9 754 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 ANKEF1Q9NU02 776 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 IRAK3Q9Y616 596 aa23.25■■□□□ 1.31
CSPG5-204ENST00000465441 TECTAO75443 2155 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 A0A087WWV3 80 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.24■■□□□ 1.31
CSPG5-204ENST00000465441 TMEM221A6NGB7 291 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 M0R296 226 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 SEC24BO95487 1268 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 NCLP19338 710 aaKnown RBP23.24■■□□□ 1.31
CSPG5-204ENST00000465441 PTENP60484 403 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 GIT2Q14161 759 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 MXD4Q14582 209 aaPredicted RBP23.24■■□□□ 1.31
CSPG5-204ENST00000465441 CES5AQ6NT32 575 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 TMEM87AQ8NBN3 555 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 SMG8Q8ND04 991 aaKnown RBP23.24■■□□□ 1.31
CSPG5-204ENST00000465441 FBXL18Q96ME1 805 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 MTMR9Q96QG7 549 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 KANSL3Q9P2N6 904 aa23.24■■□□□ 1.31
CSPG5-204ENST00000465441 POMCP01189 267 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 SP100P23497 879 aaPredicted RBP23.23■■□□□ 1.31
CSPG5-204ENST00000465441 ITIH3Q06033 890 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 ST3GAL1Q11201 340 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 TRIM29Q14134 588 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 C12orf76Q8N812 135 aaPredicted RBP23.23■■□□□ 1.31
CSPG5-204ENST00000465441 CNNM3Q8NE01 707 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 SLC22A17Q8WUG5 538 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 PBXIP1Q96AQ6 731 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 FAM193BQ96PV7 902 aaPredicted RBP23.23■■□□□ 1.31
CSPG5-204ENST00000465441 VN1R3Q9BXE9 311 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 KCNH6Q9H252 994 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 FAN1Q9Y2M0 1017 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 CNTNAP2Q9UHC6 1331 aa23.23■■□□□ 1.31
CSPG5-204ENST00000465441 NEMFO60524 1076 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 DGAT1O75907 488 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 ERLIN2O94905 339 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 ITGA4P13612 1032 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 EPCAMP16422 314 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 AXLP30530 894 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 ARL2P36404 184 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 POU5F1BQ06416 359 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 KANK3Q6NY19 840 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 IFNLR1Q8IU57 520 aaPredicted RBP23.22■■□□□ 1.31
CSPG5-204ENST00000465441 ASAP3Q8TDY4 903 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 PIGOQ8TEQ8 1089 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 CPB2Q96IY4 423 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 TMEM175Q9BSA9 504 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 EIF2AQ9BY44 585 aaKnown RBP23.22■■□□□ 1.31
CSPG5-204ENST00000465441 RNF39Q9H2S5 420 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 POMKQ9H5K3 350 aa23.22■■□□□ 1.31
CSPG5-204ENST00000465441 NRP1O14786 923 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 TSPAN1O60635 241 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 WEE2P0C1S8 567 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 ATP2B1P20020 1258 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 RARRES1P49788 294 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 TFDP1Q14186 410 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 PCBP1Q15365 356 aaKnown RBP eCLIP23.21■■□□□ 1.31
CSPG5-204ENST00000465441 RARS2Q5T160 578 aaKnown RBP23.21■■□□□ 1.31
CSPG5-204ENST00000465441 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 UBN1Q9NPG3 1134 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 MIOSQ9NXC5 875 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 IPPQ9Y573 584 aa23.21■■□□□ 1.31
CSPG5-204ENST00000465441 INO80B-WBP1J3KQ70 363 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 EIF5BO60841 1220 aaKnown RBP23.2■■□□□ 1.3
CSPG5-204ENST00000465441 XRCC6P12956 609 aaKnown RBP eCLIP23.2■■□□□ 1.3
CSPG5-204ENST00000465441 GUCY1B3Q02153 619 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 SIGLEC14Q08ET2 396 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 NCBP1Q09161 790 aaKnown RBP23.2■■□□□ 1.3
CSPG5-204ENST00000465441 CAPSQ13938 189 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 PTPN14Q15678 1187 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 PTPN21Q16825 1174 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 NECTIN4Q96NY8 510 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 KLHL5Q96PQ7 755 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 CSRNP2Q9H175 543 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 NR2E1Q9Y466 385 aa23.2■■□□□ 1.3
CSPG5-204ENST00000465441 LILRB3O75022 631 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 GLRA2P23416 452 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 MTHFRP42898 656 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 MBTD1Q05BQ5 628 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 AMHR2Q16671 573 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 NOTUMQ6P988 496 aa23.19■■□□□ 1.3
CSPG5-204ENST00000465441 ALYREFQ86V81 257 aaKnown RBP23.19■■□□□ 1.3
CSPG5-204ENST00000465441 GAD1Q99259 594 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 242.4 ms